Q0TNN0 (Q0TNN0_CLOP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alpha-mannosidase EMBL ABG84112.1

Gene names

Ordered Locus Names:

CPF_2337

Organism

Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) [Complete proteome] [HAMAP]

Taxonomic identifier

195103 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	1044 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	mannose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-mannosidase activity Inferred from electronic annotation. Source: InterPro carbohydrate binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0TNN0 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 28809D54B7F014EB	FASTA	1,044	121,218
	10 20 30 40 50 60 MRFISERIRK TYEEIGRYVY SNTLNIDNYK FIAGKYDNID EIKNAPEEGW IDFKTGDLWG 70 80 90 100 110 120 EESHGWFKTS VKVPEEFAGQ TIALSFHTFL GDWDNTTNPQ FILYVNGEHI QGLDVNHQET 130 140 150 160 170 180 ILTHNAVAGE VYNIDLHAHI GRIEGKKSTL HGKLVTIDEE ARKLYFNLSV PHIVAIKLHE 190 200 210 220 230 240 EDKRRIDMLT VLNDTINLID LRRPFTKEYN ESLKIANKYI EENFYDKMCG HEDMVATCVG 250 260 270 280 290 300 HTHIDVAWLW TVAQTREKVA RSFSTVLKLM EEYPEYIFMS SQPQLYKFLK EDHPKVYEKV 310 320 330 340 350 360 KEKVREGVWE PEGAMWLEAD CNVTSGESLI RQILHGKRFF KEEFNVDNEI LWLPDVFGYS 370 380 390 400 410 420 AALPQILKKS DVNYFMTTKI SWNQINKMPY DTFMWKGIDG TEILTHFITT TYPDQDPFKE 430 440 450 460 470 480 TMTTYCGNIH PGSIMGAWNR YQQKNINNDV LVAFGFGDGG GGATYEMLEN GKRLSKGIPG 490 500 510 520 530 540 APKVKIGKAK DYFKKLEETV KDNNKLPKWV GELYLEYHRG TYTSMGRNKR DNRVCENLYT 550 560 570 580 590 600 SAEKFNSMAM LLGKNYPLAD LNAAWETILL NQFHDILPGS SIKEVYDVTK EEYKDLIEKG 610 620 630 640 650 660 NNFVGSALDN ITSEINLKER SVIVFNSLGF ERDDIATFDV PEDIENPSVL DGEEEIICQR 670 680 690 700 710 720 IDDGEKAIFF AKGIPANGYK SFKIIESTNK EVENVSLSEK EAENDFLRIK FNEEGNIVSL 730 740 750 760 770 780 FDKRAEREVL KEGTLGNRIQ AFEDKPMEYS NWDIDIYYKE KMWNVDDVQS IEVVEEGPVR 790 800 810 820 830 840 STLRIERKFL ESTIVQNIYV YKDLDRIDFN SYVDWKEHEV LLKTSFPIDL NATEATYEIQ 850 860 870 880 890 900 YGNVKRPTHS NTSWDEARFE VCGQKWADLS EGDFGISLLN NCKYGHDIQD GDMRLTLLKS 910 920 930 940 950 960 GTHPWTETDQ EEHFFTYSIY PHMGTWKDAH TVQKAYELNQ PLYTKVCEKH EGILEDTLGL 970 980 990 1000 1010 1020 VKVNKDNIMI EVIKKAEDTD HLIIRMYEFF NSRTKATLEF SREIEEAFEC NLMERNLEEA 1030 1040 KFEGEKIEFT INPFEIKTFK VKLK

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000246 Genomic DNA. Translation: ABG84112.1.
RefSeq	YP_696760.1. NC_008261.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q0TNN0.
Protein family/group databases
CAZy	GH38. Glycoside Hydrolase Family 38.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4201561.
GenomeReviews	Gene locus CPF_2337 in contig CP000246_GR.
KEGG	cpf:CPF_2337.
PATRIC	19486926. VBICloPer106549_2276.
TIGR	CPF_2337.
Phylogenomic databases
eggNOG	COG0383.
HOGENOM	HBG286952.
OMA	GNVKRPT.
ProtClustDB	CLSK899415.
Family and domain databases
InterPro	IPR011013. Glyco_hydro-type_carb-bd. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR013780. Glyco_hydro_13_b. IPR011682. Glyco_hydro_38_C. IPR015341. Glyco_hydro_38_cen_dom. IPR000602. Glyco_hydro_38_core. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.110.10. Glyco_hydro_38_core. 1 hit.
KO	K01191.
Pfam	PF09261. Alpha-mann_mid. 1 hit. PF01074. Glyco_hydro_38. 1 hit. PF07748. Glyco_hydro_38C. 1 hit. [Graphical view]
SMART	SM00872. Alpha-mann_mid. 1 hit. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 1 hit. SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0TNN0_CLOP1

Accession

Primary (citable) accession number: Q0TNN0

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)