Q0TMD3 (Q0TMD3_CLOP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Hydrolase, TatD family EMBL ABG82743.1

Gene names

Ordered Locus Names:

CPF_2843

Organism

Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) [Complete proteome] [HAMAP]

Taxonomic identifier

195103 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	256 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABG82743.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	endodeoxyribonuclease activity, producing 5'-phosphomonoesters Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0TMD3 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 9B5D1FFED6739C1C	FASTA	256	29,578
	10 20 30 40 50 60 MKYKIFDTHA HYDSDSFDED RENVIKELQE NGVIGVLNCG SDLYGLRKSV ELAKEFDMFY 70 80 90 100 110 120 AAVGIHPENA DEFNDDVVKE IKEFVKNEKV KAIGEIGLDY YWEENPPREV QKEVFRAQMK 130 140 150 160 170 180 LADELNLPVV IHDRDAHKDT LEIMKEFPNV IGVVHCFSGS VEFAKECIKL GYYIGFTGVL 190 200 210 220 230 240 TFKNAKKLVD VCREIPAERM LVETDCPFMA PVPFRGKRNK SDYIEYIIDK MSEIRGISGE 250 EMNEILLNNK KRLFKI

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000246 Genomic DNA. Translation: ABG82743.1.
RefSeq	YP_697207.1. NC_008261.1.
3D structure databases
ProteinModelPortal	Q0TMD3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0TMD3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4203039.
GenomeReviews	Gene locus CPF_2843 in contig CP000246_GR.
KEGG	cpf:CPF_2843.
PATRIC	19487946. VBICloPer106549_2724.
TIGR	CPF_2843.
Phylogenomic databases
eggNOG	COG0084.
HOGENOM	HBG629833.
OMA	LPLVIHT.
ProtClustDB	CLSK883350.
Family and domain databases
InterPro	IPR012278. DNase_TatD. IPR015991. DNase_TatD_bac-type. IPR001130. TatD_superfamily. [Graphical view]
KO	K03424.
PANTHER	PTHR10060. TatD_DNase. 1 hit.
Pfam	PF01026. TatD_DNase. 1 hit. [Graphical view]
PIRSF	PIRSF005902. DNase_TatD. 1 hit.
TIGRFAMs	TIGR00010. TIGR00010. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0TMD3_CLOP1

Accession

Primary (citable) accession number: Q0TMD3

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)