Q0TA65 (Q0TA65_ECOL5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-binding protein HU-alpha EMBL ABG72164.1

Gene names

Ordered Locus Names:

ECP_4213

Organism

Escherichia coli O6:K15:H31 (strain 536 / UPEC) [Complete proteome] [HAMAP] EMBL ABG72164.1

Taxonomic identifier

362663 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	90 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	DNA-binding EMBL ABG72164.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0TA65 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 6B5B8536FDBD13DC	FASTA	90	9,535
	10 20 30 40 50 60 MNKTQLIDVI AEKAELSKTQ AKAALESTLA AITESLKEGD AVQLVGFGTF KVNHRAERTG 70 80 90 RNPQTGKEIK IAAANVPAFV SGKALKDAVK

References

[1]

"Role of pathogenicity island-associated integrases in the genome plasticity of uropathogenic Escherichia coli strain 536." Hochhut B., Wilde C., Balling G., Middendorf B., Dobrindt U., Brzuszkiewicz E., Gottschalk G., Carniel E., Hacker J. Mol. Microbiol. 61:584-595(2006) [PubMed: 16879640] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 536 EMBL ABG72164.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000247 Genomic DNA. Translation: ABG72164.1.
RefSeq	YP_672065.1. NC_008253.1.
3D structure databases
ProteinModelPortal	Q0TA65.
SMR	Q0TA65. Positions 1-90.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0TA65.
Proteomic databases
PRIDE	Q0TA65.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000047281; EBESCP00000045470; EBESCG00000046331.
GeneID	4188685.
GenomeReviews	Gene locus ECP_4213 in contig CP000247_GR.
KEGG	ecp:ECP_4213.
PATRIC	18199349. VBIEscCol77757_4259.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0776.
GeneTree	EBGT00050000010314.
HOGENOM	HBG705085.
OMA	MNSITYE.
PhylomeDB	Q0TA65.
ProtClustDB	PRK10753.
Family and domain databases
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR020816. Histone-like_DNA-bd_CS. IPR010992. IHF-like_DNA-bd. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
KO	K05787.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
PRINTS	PR01727. DNABINDINGHU.
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0TA65_ECOL5

Accession

Primary (citable) accession number: Q0TA65

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)