Q0T874 (Q0T874_SHIF8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Carbonic anhydrase RuleBase RU003956
EC=4.2.1.1 RuleBase RU003956

Gene names

Name:	yadF EMBL ABF02402.1
Ordered Locus Names:	SFV_0117

Organism

Shigella flexneri serotype 5b (strain 8401) [Complete proteome] [HAMAP]

Taxonomic identifier

373384 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella

Protein attributes

Sequence length	220 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	H2CO3 = CO2 + H2O. RuleBase RU003956
Sequence similarities	Belongs to the beta-class carbonic anhydrase family. RuleBase RU003956

Ontologies

Keywords
Ligand	Zinc RuleBase RU003956
Molecular function	Lyase RuleBase RU003956
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbon utilization Inferred from electronic annotation. Source: InterPro
Molecular function	carbonate dehydratase activity Inferred from electronic annotation. Source: EC zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0T874 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 48A9086BE9428452	FASTA	220	25,097
	10 20 30 40 50 60 MKDIDTLISN NALWSKMLVE EDPGFFEKLA QAQKPRFLWI GCSDSRVPAE RLTGLEPGEL 70 80 90 100 110 120 FVHRNVANLV IHTDLNCLSV VQYAVDVLEV EHIIICGHYG CGGVQAAVEN PELGLINNWL 130 140 150 160 170 180 LHIRDIWFKH SSLLGEMPQE RRLDTLCELN VMEQVYNLGH STIMQSAWKR GQKVTIHGWA 190 200 210 220 YGIHDGLLRD LDVTATNRET LEQRYRHGIS NLKLKHANHK

References

[1]

"Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a." Nie H., Yang F., Zhang X., Yang J., Chen L., Wang J., Xiong Z., Peng J., Sun L., Dong J., Xue Y., Xu X., Chen S., Yao Z., Shen Y., Jin Q. BMC Genomics 7:173-173(2006) [PubMed: 16822325] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000266 Genomic DNA. Translation: ABF02402.1.
RefSeq	YP_687707.1. NC_008258.1.
3D structure databases
ProteinModelPortal	Q0T874.
SMR	Q0T874. Positions 2-215.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0T874.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000096246; EBESCP00000092442; EBESCG00000095290.
GeneID	4210139.
GenomeReviews	Gene locus SFV_0117 in contig CP000266_GR.
KEGG	sfv:SFV_0117.
PATRIC	18723156. VBIShiFle33408_0135.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0288.
GeneTree	EBGT00050000009995.
HOGENOM	HBG711150.
OMA	CEINVVE.
ProtClustDB	PRK10437.
Enzyme and pathway databases
BioCyc	SFLE373384:SFV_0117-MONOMER.
Family and domain databases
InterPro	IPR001765. Carbonic_anhydrase. IPR015892. Carbonic_anhydrase_CS. [Graphical view]
Gene3D	G3DSA:3.40.1050.10. CO_anhd_prok_pln. 1 hit.
KO	K01673.
PANTHER	PTHR11002. Carbonic_anhydrase. 1 hit.
Pfam	PF00484. Pro_CA. 1 hit. [Graphical view]
SMART	SM00947. Pro_CA. 1 hit. [Graphical view]
SUPFAM	SSF53056. Prok_plnt_COanhd. 1 hit.
PROSITE	PS00704. PROK_CO2_ANHYDRASE_1. 1 hit. PS00705. PROK_CO2_ANHYDRASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0T874_SHIF8

Accession

Primary (citable) accession number: Q0T874

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)