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Protein
Submitted name:

Transcriptional regulator for nitrite reductase (Cytochrome c552)

Gene

dniR

Organism
Shigella flexneri serotype 5b (strain 8401)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Protein family/group databases

CAZyiCBM50 Carbohydrate-Binding Module Family 50
GH23 Glycoside Hydrolase Family 23

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator for nitrite reductase (Cytochrome c552)Imported
Gene namesi
Name:dniRImported
Ordered Locus Names:SFV_0195Imported
OrganismiShigella flexneri serotype 5b (strain 8401)Imported
Taxonomic identifieri373384 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeShigella
Proteomesi
  • UP000000659 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

ProteinModelPortaliQ0T803
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini341 – 384LysMInterPro annotationAdd BLAST44
Domaini400 – 448LysMInterPro annotationAdd BLAST49

Phylogenomic databases

HOGENOMiHOG000258639
KOiK08307
OMAiQDVWERM

Family and domain databases

CDDicd00118 LysM, 2 hits
Gene3Di3.10.350.10, 2 hits
InterProiView protein in InterPro
IPR018392 LysM_dom
IPR036779 LysM_dom_sf
IPR023346 Lysozyme-like_dom_sf
IPR000189 Transglyc_AS
IPR008258 Transglycosylase_SLT_dom_1
PfamiView protein in Pfam
PF01476 LysM, 2 hits
PF01464 SLT, 1 hit
SMARTiView protein in SMART
SM00257 LysM, 2 hits
SUPFAMiSSF53955 SSF53955, 1 hit
PROSITEiView protein in PROSITE
PS51782 LYSM, 2 hits
PS00922 TRANSGLYCOSYLASE, 1 hit

Sequencei

Sequence statusi: Complete.

Q0T803-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAKAILLAS VLLVGCQSTG NVQQHAQSLS AAGQGEAAKF TSQARWMDDG
60 70 80 90 100
TSIAPDGDLW AFIGDELKMG IPENDRIREQ KQKYLRNKSY LHDVTLRAEP
110 120 130 140 150
YMYWIAGQVK KRNMPMELVL LPIVESAFDP HATSGANAAG IWQIIPSTGR
160 170 180 190 200
NYGLKQTRNY DARRDVVAST TAALNMMQRL NKMFDDDWLL TVAAYNSGEG
210 220 230 240 250
RVMKAIKTNK ARGKSTDFWS LPLPQETKQY VPKMLALSDI LKNSKRYGVR
260 270 280 290 300
LPTTDESRAL ARVHLSSPVE MAKVADMAGI SVSKLKTFNA GVKGSTLGAS
310 320 330 340 350
GPQYVMVPKK HADQLRESLA SGEIAAVQST LVADNTPLNS RVYTVRSGDT
360 370 380 390 400
LSSIASRLGV STKDLQQWNK LRGSKLKPGQ SLTIGAGSSA QRLANNSDSI
410 420 430 440 450
TYRVRKGDSL SSIAKRHGVN IKDVMRWNSD TANLQPGDKL TLFVKNNNMP

DS
Length:452
Mass (Da):49,476
Last modified:September 5, 2006 - v1
Checksum:i43CD5B416C59484A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000266 Genomic DNA Translation: ABF02473.1

Genome annotation databases

EnsemblBacteriaiABF02473; ABF02473; SFV_0195
KEGGisfv:SFV_0195

Similar proteinsi

Entry informationi

Entry nameiQ0T803_SHIF8
AccessioniPrimary (citable) accession number: Q0T803
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: March 28, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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