Q0T6I8 (Q0T6I8_SHIF8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative pectinesterase EMBL ABF02988.1

Gene names

Name:	ybhC EMBL ABF02988.1
Ordered Locus Names:	SFV_0755

Organism

Shigella flexneri serotype 5b (strain 8401) [Complete proteome] [HAMAP]

Taxonomic identifier

373384 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella

Protein attributes

Sequence length	427 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pectinesterase family. RuleBase RU004180

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall modification Inferred from electronic annotation. Source: InterPro
Cellular component	cell wall Inferred from electronic annotation. Source: InterPro
Molecular function	pectinesterase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0T6I8 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 23946909C407D0C4	FASTA	427	46,021
	10 20 30 40 50 60 MNTFSVSRLA LALAFGVTLT ACSSTPPDQR PSDQTAPGTS SRPILSAKEA LNFDAQHYFA 70 80 90 100 110 120 SLTPGAAAWN PSPITLPAQP DFVVGPAGTQ GVTHTTIQAA VDAAIIKRTN KRQYIAVMPG 130 140 150 160 170 180 EYQGTVYVPA APGGITLYGT GEKPIDVKIG LSLDGGMSPA DWRHDVNPRG KYMPGKPAWY 190 200 210 220 230 240 MYDSCQSKRS DSIGVLCSAV FWSQNNGLQL QNLTIENTLG DSVDAGNHPA VALRTDGDQV 250 260 270 280 290 300 QINNVNILGR QNTFFVTKSG VQNRLETNRQ PRTLVTNSYI EGDVDIVSGR GAVVFDNTEF 310 320 330 340 350 360 RVVNSRTQQE AYVFAPATLS NIYYGFLAVN SRFNASGDGV AQLGRSLDVD ANTNGQVVIR 370 380 390 400 410 420 DSAINEGFNT AKPWADAVIS NRPFAGNTGS VDDNDEIQRN LNDTNYNRMW EYNNRGVGSK VVAEAKK

References

[1]

"Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a." Nie H., Yang F., Zhang X., Yang J., Chen L., Wang J., Xiong Z., Peng J., Sun L., Dong J., Xue Y., Xu X., Chen S., Yao Z., Shen Y., Jin Q. BMC Genomics 7:173-173(2006) [PubMed: 16822325] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000266 Genomic DNA. Translation: ABF02988.1.
RefSeq	YP_688293.1. NC_008258.1.
3D structure databases
ProteinModelPortal	Q0T6I8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0T6I8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000094407; EBESCP00000090603; EBESCG00000093451.
GeneID	4207327.
GenomeReviews	Gene locus SFV_0755 in contig CP000266_GR.
KEGG	sfv:SFV_0755.
PATRIC	18724655. VBIShiFle33408_0857.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4677.
GeneTree	EBGT00050000010934.
HOGENOM	HBG416454.
OMA	FLATNSR.
ProtClustDB	PRK10531.
Enzyme and pathway databases
BioCyc	SFLE373384:SFV_0755-MONOMER.
Family and domain databases
InterPro	IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. IPR018040. Pectinesterase_AS. IPR000070. Pectinesterase_cat. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KO	K01051.
Pfam	PF01095. Pectinesterase. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
PROSITE	PS00503. PECTINESTERASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0T6I8_SHIF8

Accession

Primary (citable) accession number: Q0T6I8

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)