Q0T584 (Q0T584_SHIF8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein ycjT EMBL ABF03531.1

Gene names

Name:	ycjT EMBL ABF03531.1
Ordered Locus Names:	SFV_1332

Organism

Shigella flexneri serotype 5b (strain 8401) [Complete proteome] [HAMAP]

Taxonomic identifier

373384 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella

Protein attributes

Sequence length	755 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0T584 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: CBAF271033746623	FASTA	755	84,810
	10 20 30 40 50 60 MTRPVTLSEP HFSQHTLNKY ASLMAQGNGY LGLRASHEED YTRQTRGMYL AGLYHRAGKG 70 80 90 100 110 120 EINELVNLRG VLGVEIAING EVFSLSREAW QRELDFASGE LRRSVVWRTS NGAGYTIASR 130 140 150 160 170 180 RFVSADQLPL IALEITIMPL DADASVLIST GIDATQTNHG RQHLDETQVR VFGQHLMQGI 190 200 210 220 230 240 YTTQDGRSDV AISCCCQVSG DVQQCYTAKE RRLLQHTSTQ LHAGETVTLQ KLVWIDWRDD 250 260 270 280 290 300 RQAALDEWGS VSLRQLEMCA QQSYDQHLAA STENWRQWWQ KRRITVNGGD AHDQQALDYA 310 320 330 340 350 360 LYHLRIMTPA HGERSSIAAK GLTGEGYKGH VFWDTEVFLL PFHLFSDPTV ARSLLRYRWH 370 380 390 400 410 420 NLPGAQEKAR RNGWQGALFP WESARSGEEE TPEFAAINIR TGLRQKVASA QAEHHLVADI 430 440 450 460 470 480 AWAVIQYWQT TGDESFIAHE GMALLLETAK FWISRAVRVN DRLEIHDVIG PDEYTEHVNN 490 500 510 520 530 540 NAFTSYMVYY NVQQALSIAR QFGCSDDAFI HRAEMFLKEL RLPEIQPDGV LPQDDSFMTK 550 560 570 580 590 600 PAINLAKYKA AAGKQTILLD YSRAEVNEMQ ILKQADVVML NYMLPEQFSS ASCLANLQFY 610 620 630 640 650 660 EPRTIHDSSL SKAIHGIVAA RCGLLTQSYQ FWREGTEIDL GADPHSCDDG IHAAATGAIW 670 680 690 700 710 720 LGAIQGFAGV SVRDGELHLN PALPEQWQQL SFPLFWQGCE LQVTLDAQRI AIRTSAPVSL 730 740 750 RLDGQLISVA EESVFCLGDF ILPFNGTATT HQEDE

References

[1]

"Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a." Nie H., Yang F., Zhang X., Yang J., Chen L., Wang J., Xiong Z., Peng J., Sun L., Dong J., Xue Y., Xu X., Chen S., Yao Z., Shen Y., Jin Q. BMC Genomics 7:173-173(2006) [PubMed: 16822325] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000266 Genomic DNA. Translation: ABF03531.1.
RefSeq	YP_688836.1. NC_008258.1.
3D structure databases
ProteinModelPortal	Q0T584.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0T584.
Protein family/group databases
CAZy	GH65. Glycoside Hydrolase Family 65.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000095090; EBESCP00000091286; EBESCG00000094134.
GeneID	4209366.
GenomeReviews	Gene locus SFV_1332 in contig CP000266_GR.
KEGG	sfv:SFV_1332.
PATRIC	18726022. VBIShiFle33408_1532.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1554.
GeneTree	EBGT00050000009369.
HOGENOM	HBG727686.
OMA	YDRSEAD.
ProtClustDB	CLSK880112.
Enzyme and pathway databases
BioCyc	SFLE373384:SFV_1332-MONOMER.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR011013. Glyco_hydro-type_carb-bd. IPR005194. Glyco_hydro_65_C. IPR005195. Glyco_hydro_65_M. IPR005196. Glyco_hydro_65_N. IPR017045. Malt_Pase/Glycosyl_Hdrlase. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit. G3DSA:2.70.98.40. Glyco_hydro_65_N. 1 hit.
KO	K04844.
Pfam	PF03633. Glyco_hydro_65C. 1 hit. PF03632. Glyco_hydro_65m. 1 hit. PF03636. Glyco_hydro_65N. 1 hit. [Graphical view]
PIRSF	PIRSF036289. Glycosyl_hydrolase_malt_phosph. 1 hit.
SUPFAM	SSF74650. Gal_mut_like. 1 hit. SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0T584_SHIF8

Accession

Primary (citable) accession number: Q0T584

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)