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Q0T1E1 (Q0T1E1_SHIF8) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ascB EMBL ABF04874.1
Ordered Locus Names:SFV_2789 EMBL ABF04874.1
OrganismShigella flexneri serotype 5b (strain 8401) [Complete proteome] [HAMAP] EMBL ABF04874.1
Taxonomic identifier373384 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length474 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU004468
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0T1E1 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: 5159D967752DD406

FASTA47453,865
        10         20         30         40         50         60 
MSVFPEGFLW GGALAANQSE GAFREGGKGL TTVDMIPHGE HRMAVKLGLE KRFQLRDDEF 

        70         80         90        100        110        120 
YPSHEATDFY HRYKEDIALM AEMGFKVFRT SIAWSRLFPQ DDEITPNQQG IAFYRPVFEE 

       130        140        150        160        170        180 
CKKYGIEPLV TLCHFDVPMH LVTEYGSWRN RKLVEFFSRY ARTCFEAFDG LVKYWLTFNE 

       190        200        210        220        230        240 
INIMLHSPFS GAGLVFEEGE NQDQVKYQAA HHQLVASALA TKIAHEVNPQ NQVGCMLAGG 

       250        260        270        280        290        300 
NFYPYSCKPE DVWAALEKDR ENLFFIDVQA RGAYPAYSAR VFREKGVTID KALGDDEILK 

       310        320        330        340        350        360 
NTVDFVSFSY YASRCASAEM NANNSSAANV VKSLRNPYLQ VSDWGWGIDP LGLRITMNMM 

       370        380        390        400        410        420 
YDRYQKPLFL VENGLGAKDE LAANGEINDD YRISYLREHI RAMGEAIADG IPLMGYTTWG 

       430        440        450        460        470 
CIDLVSASTG EMSKRYGFVY VDRDDAGNGT LTHTRKKSFW WYKKVIASNG EDLE 

« Hide

References

[1]"Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a."
Nie H., Yang F., Zhang X., Yang J., Chen L., Wang J., Xiong Z., Peng J., Sun L., Dong J., Xue Y., Xu X., Chen S., Yao Z., Shen Y., Jin Q.
BMC Genomics 7:173-173(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 8401 EMBL ABF04874.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000266 Genomic DNA. Translation: ABF04874.1.
RefSeqYP_690179.1. NC_008258.1.

3D structure databases

ProteinModelPortalQ0T1E1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING373384.SFV_2789.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF04874; ABF04874; SFV_2789.
GeneID4209094.
KEGGsfv:SFV_2789.
PATRIC18729445. VBIShiFle33408_3199.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2723.
HOGENOMHOG000088631.
KOK01223.
OMARDLFNEC.
OrthoDBEOG6F81PM.

Enzyme and pathway databases

BioCycSFLE373384:GHZM-2785-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0T1E1_SHIF8
AccessionPrimary (citable) accession number: Q0T1E1
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)