Q0T162 (Q0T162_SHIF8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
L-serine dehydratase (Deaminase), L-SD2 EMBL ABF04953.1

Gene names

Name:	sdaB EMBL ABF04953.1
Ordered Locus Names:	SFV_2876

Organism

Shigella flexneri serotype 5b (strain 8401) [Complete proteome] [HAMAP]

Taxonomic identifier

373384 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella

Protein attributes

Sequence length	455 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	gluconeogenesis Inferred from electronic annotation. Source: InterPro
Molecular function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro L-serine ammonia-lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0T162 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 4B38DB013996FDC8	FASTA	455	48,723
	10 20 30 40 50 60 MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIARNLLK DVTRVVVDVY GSLSLTGKGH 70 80 90 100 110 120 HTDIAIIMGL AGNLPDTVDI DSIPGFIQDV NTHGRLMLAN GQHEVEFPVD QCMNFHADNL 130 140 150 160 170 180 SLHENGMRIT ALAGDKVVYS QTYYSIGGGF IVDEEHFGQQ DSAPVEVPYP YSSAADLQKH 190 200 210 220 230 240 CQETGLSLSG LMMKNELALH SKEELEQHLA NVWEVMRGGI ERGISTEGVL PGKLRVPRRA 250 260 270 280 290 300 AALRRMLVSQ DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIIPAVLAYY 310 320 330 340 350 360 DKFIREVNAN SLARYLLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGA 370 380 390 400 410 420 SPAQVCIAAE IAMEHNLGLT CDPVAGQVQV PCIERNAIAA VKAVNAARMA LRRTSEPRVC 430 440 450 LDKVIETMYE TGKDMNAKYR ETSRGGLAMK IVACD

References

[1]

"Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a." Nie H., Yang F., Zhang X., Yang J., Chen L., Wang J., Xiong Z., Peng J., Sun L., Dong J., Xue Y., Xu X., Chen S., Yao Z., Shen Y., Jin Q. BMC Genomics 7:173-173(2006) [PubMed: 16822325] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000266 Genomic DNA. Translation: ABF04953.1.
RefSeq	YP_690258.1. NC_008258.1.
3D structure databases
ProteinModelPortal	Q0T162.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0T162.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000094384; EBESCP00000090580; EBESCG00000093428.
GeneID	4210296.
GenomeReviews	Gene locus SFV_2876 in contig CP000266_GR.
KEGG	sfv:SFV_2876.
PATRIC	18729641. VBIShiFle33408_3292.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1760.
GeneTree	EBGT00050000009684.
HOGENOM	HBG304565.
OMA	ENGMRIS.
ProtClustDB	CLSK880494.
Enzyme and pathway databases
BioCyc	SFLE373384:SFV_2876-MONOMER.
Family and domain databases
InterPro	IPR004644. Fe-S_L-Ser_mono. IPR005130. Ser_deHydtase-like_asu. IPR005131. Ser_deHydtase_bsu. [Graphical view]
KO	K01752.
Pfam	PF03313. SDH_alpha. 1 hit. PF03315. SDH_beta. 1 hit. [Graphical view]
TIGRFAMs	TIGR00720. Sda_mono. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0T162_SHIF8

Accession

Primary (citable) accession number: Q0T162

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)