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Q0SYR6 (Q0SYR6_SHIF8) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:bglB EMBL ABF05799.1
Ordered Locus Names:SFV_3786
OrganismShigella flexneri serotype 5b (strain 8401) [Complete proteome] [HAMAP]
Taxonomic identifier373384 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Sequences

Sequence LengthMass (Da)Tools
Q0SYR6 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: B9DF8DAD0CAF0D0F

FASTA46452,639
        10         20         30         40         50         60 
MKAFPETFLW GGATAANQVE GAWLEDGKGI TTSDLQPHGV MGKMEPRILG KENIKDVAID 

        70         80         90        100        110        120 
FYYRYPEDIA LFAEMGFTCL RISIAWARIF PQGDEAEPNE AGLAFYDRLF DEMAQAGIKP 

       130        140        150        160        170        180 
LVTLSHYEML YGLVKNYGGW ANRAVIDHFE HYARTVFTRY QHKVALWLTF NEINMSLHAP 

       190        200        210        220        230        240 
FTGVGLAEES GEAEVYQAIH HQLVASARAV KAYHSLIPEA KIGNMLLGGL VYPLTCQPQD 

       250        260        270        280        290        300 
MLQAMEENRR WMFFGDVQAR GQYPGYMQRF FRDHNITIEM TESDAEDLKH TVDFISFSYY 

       310        320        330        340        350        360 
MTGCVSHDES INKNAQGNIL NMIPNPHLKS SEWGWQIDPV GLRVLLNTLW DRYQKPLFIV 

       370        380        390        400        410        420 
ENGLGVKDSV EADGSIQDDY RIAYLNDHLV QVNEAIADGV DIMGYTSWGP IDLVSASHSQ 

       430        440        450        460 
MSKRYGFIYV DRDDNGEGSL TRTRKKSFGW YAEVIKTRGL SLKK 

« Hide

References

[1]"Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a."
Nie H., Yang F., Zhang X., Yang J., Chen L., Wang J., Xiong Z., Peng J., Sun L., Dong J., Xue Y., Xu X., Chen S., Yao Z., Shen Y., Jin Q.
BMC Genomics 7:173-173(2006) [PubMed: 16822325] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000266 Genomic DNA. Translation: ABF05799.1.
RefSeqYP_691104.1. NC_008258.1.

3D structure databases

ProteinModelPortalQ0SYR6.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0SYR6.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000095674; EBESCP00000091870; EBESCG00000094718.
GeneID4210473.
GenomeReviewsGene locus SFV_3786 in contig CP000266_GR.
KEGGsfv:SFV_3786.
PATRIC18731723. VBIShiFle33408_4302.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2723.
GeneTreeEBGT00050000010166.
HOGENOMHBG316462.
OMAFKCLRTS.
ProtClustDBCLSK891820.

Enzyme and pathway databases

BioCycSFLE373384:SFV_3786-MONOMER.

Family and domain databases

InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK01223.
PANTHERPTHR10353. Glyco_hydro_1. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0SYR6_SHIF8
AccessionPrimary (citable) accession number: Q0SYR6
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)