Q0SYF5 (Q0SYF5_SHIF8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lipid A-core, surface polymer ligase EMBL ABF05910.1

Gene names

Name:	waaL EMBL ABF05910.1
Ordered Locus Names:	SFV_3902

Organism

Shigella flexneri serotype 5b (strain 8401) [Complete proteome] [HAMAP]

Taxonomic identifier

373384 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella

Protein attributes

Sequence length	335 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABF05910.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	ligase activity Inferred from electronic annotation. Source: UniProtKB-KW lipopolysaccharide 3-alpha-galactosyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0SYF5 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 0C7156ACFC2E0CF7	FASTA	335	39,430
	10 20 30 40 50 60 MSQLNDSDII LFEYNFHYQN IRSKNTLDIA FGIDRNFLFG CGVAIASILL NNREISCEFH 70 80 90 100 110 120 VFTDYISDKD KLYFSDLAKQ YNSRINIYVI NCDKLKSLPS TKNWTYATYF RFIIADYFYH 130 140 150 160 170 180 KHEKILYLDA DIACKGSIKE LLDYQFSTNE IAAVVAERDI EWWQNRASVL TTPQLASGYF 190 200 210 220 230 240 NAGFLLINID EWNLNNISSK AIEMLRDPDW VSKITHLDQD VLNVLLNGKV KFISEKYNTR 250 260 270 280 290 300 YSINYELKDK VDNPVNDDTV FIHYVGPTKP WHEWADYPVS RSFLIAKAAS PWSKEDLLKP 310 320 330 VNSNQYRYCA KHKFKQKHYM AGIFNYLKYY KEKCF

References

[1]

"Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a." Nie H., Yang F., Zhang X., Yang J., Chen L., Wang J., Xiong Z., Peng J., Sun L., Dong J., Xue Y., Xu X., Chen S., Yao Z., Shen Y., Jin Q. BMC Genomics 7:173-173(2006) [PubMed: 16822325] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000266 Genomic DNA. Translation: ABF05910.1.
RefSeq	YP_691215.1. NC_008258.1.
3D structure databases
ProteinModelPortal	Q0SYF5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0SYF5.
Protein family/group databases
CAZy	GT8. Glycosyltransferase Family 8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000094248; EBESCP00000090444; EBESCG00000093292.
GeneID	4210607.
GenomeReviews	Gene locus SFV_3902 in contig CP000266_GR.
KEGG	sfv:SFV_3902.
PATRIC	18731991. VBIShiFle33408_4433.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1442.
GeneTree	EBGT00050000011727.
HOGENOM	HBG417202.
OMA	MLADKAV.
ProtClustDB	PRK15171.
Enzyme and pathway databases
BioCyc	SFLE373384:SFV_3902-MONOMER.
Family and domain databases
InterPro	IPR002495. Glyco_trans_8. IPR013645. Glyco_transf_8N. [Graphical view]
KO	K03275.
Pfam	PF01501. Glyco_transf_8. 1 hit. PF08437. Glyco_transf_8N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0SYF5_SHIF8

Accession

Primary (citable) accession number: Q0SYF5

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)