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Q0SWK7 (Q0SWK7_CLOPS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Ordered Locus Names:CPR_0156
OrganismClostridium perfringens (strain SM101 / Type A) [Complete proteome] [HAMAP] EMBL ABG86644.1
Taxonomic identifier289380 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length689 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1571Proton donor By similarity PIRSR PIRSR001084-1
Active site3181Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1221Zinc By similarity PIRSR PIRSR001084-3
Metal binding1621Zinc By similarity PIRSR PIRSR001084-3
Metal binding1641Zinc By similarity PIRSR PIRSR001084-3
Metal binding1671Zinc By similarity PIRSR PIRSR001084-3
Binding site1181Substrate By similarity PIRSR PIRSR001084-2
Binding site1561Substrate By similarity PIRSR PIRSR001084-2
Binding site3261Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
Q0SWK7 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: A0B164E02C55D3D2

FASTA68979,974
        10         20         30         40         50         60 
MKNYGPISSK VTKMLHGADY NPEQWIDIPN IWGEDVRLMK LSHTNVVAVG IFSWTMLEPE 

        70         80         90        100        110        120 
EGKFNFEWLD EIMDLMHKNG NYVILATPSG AKPIWMAHKY PETLRVAPNR VRNLYGERHN 

       130        140        150        160        170        180 
HCYTSPIYRE KIAIIDRLLA ERYKDHPALI LWHISNEFEG QCYCPLCEQA FRDFLRKKYD 

       190        200        210        220        230        240 
NDINKLNKAW WTKFWSHTYA SFDEIEAPAP HGEPALHGLN LDWMRFVTHQ TLDYYKHERS 

       250        260        270        280        290        300 
ILKEITPDIP VTTNFHDYIS LFRGIDYWKF APYLDVVSWD NYPYWHGERT DDHEGSRIGF 

       310        320        330        340        350        360 
IHDLNRAILN GKPFMMMESS PSSTNWQPVA KLRRPGMHVL SSLQAVAHGS DTVQYFQWRK 

       370        380        390        400        410        420 
SRGSSEKFHG AVVDHCGHEN TRVFRDVTKV GEILSKLDDV IGTSVEPQVA VIYDWENYWA 

       430        440        450        460        470        480 
INDAQGPRIE QKDYFETCQK HYKAFWDMSI PTDVINMDCD FSKYKVVVAP MLYMVRPGVG 

       490        500        510        520        530        540 
ERLEEFVNNG GTLVTTYWSG IVDENDLCFL GGFPGPLKKV TGIWAEELDA LYDEDVNYVS 

       550        560        570        580        590        600 
IEEGNSLGMK GEYEARIFCD LIHSEGAEIL ATYKTDFYKG MPALTCNNFG EGQAYYIAFR 

       610        620        630        640        650        660 
NNDEFLSDFY SSLAKKLTLK RAIEIDLPNG INAQVRMDEK NEFVFFMNFS SEEKTIDIKD 

       670        680 
LDLTDMVTGE KVTKEMEIEP YGVRIVRRK

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000312 Genomic DNA. Translation: ABG86644.1.
RefSeqYP_697493.1. NC_008262.1.

3D structure databases

ProteinModelPortalQ0SWK7.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0SWK7.

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4205731.
GenomeReviewsGene locus CPR_0156 in contig CP000312_GR.
KEGGcpr:CPR_0156.
PATRIC19488587. VBICloPer122123_0141.
TIGRCPR_0156.

Phylogenomic databases

eggNOGCOG1874.
HOGENOMHBG476453.
OMAHGSDTVQ.
ProtClustDBCLSK810799.

Family and domain databases

InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR013780. Glyco_hydro_13_b.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0SWK7_CLOPS
AccessionPrimary (citable) accession number: Q0SWK7
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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