Q0SWA8 (Q0SWA8_CLOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
[Fe] hydrogenase EMBL ABG86513.1
EC=1.12.7.2 EMBL ABG86513.1

Gene names

Ordered Locus Names:

CPR_0261

Organism

Clostridium perfringens (strain SM101 / Type A) [Complete proteome] [HAMAP] EMBL ABG86513.1

Taxonomic identifier

289380 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	449 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABG86513.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: UniProtKB-KW electron carrier activity Inferred from electronic annotation. Source: InterPro ferredoxin hydrogenase activity Inferred from electronic annotation. Source: EC metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0SWA8 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 60C367B6E2ADC4B7	FASTA	449	49,627
	10 20 30 40 50 60 MNKKYDSLFK ELISSYYSED NFDEKLNDIV KNNFNSKEDA IDVLSSLCGV DIDKNSDNIA 70 80 90 100 110 120 YDIRKAITTQ KIKKNIVDKV SVCTKNCSKE SKGKCQSLCP FDAILTDPID NSKYIDPNLC 130 140 150 160 170 180 QNCGICVQVC ESGHFLDRIE LLPIIDLIKN NETVIAAVAP AIAGQFGENV SLDMLREAFI 190 200 210 220 230 240 KIGFSDMIEV AFAADILSIK EAVEFNHHVE KTGDILITSC CCPMWVAMLR KCYKDLVKDV 250 260 270 280 290 300 SPSVSPMIAA GRVIKKLNKD AKVVFIGPCI AKKAEAREKD LVGDIDYVLT FEELKGIFEA 310 320 330 340 350 360 LKIDLSSMKG VPSIEYTSRG GRLYARTGGV SEAINDVVKE LYPDKAKIFK AVQANGVKEC 370 380 390 400 410 420 KELLNKVQSG ELKANFIEGM GCVGGCVGGP KRIVDPSIGK KHVDEVAYNS PIKVATHSHT 430 440 MDEVLLRLGI NSLKSFEDKE KISIFEREF

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000312 Genomic DNA. Translation: ABG86513.1.
RefSeq	YP_697592.1. NC_008262.1.
3D structure databases
ProteinModelPortal	Q0SWA8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0SWA8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4205519.
GenomeReviews	Gene locus CPR_0261 in contig CP000312_GR.
KEGG	cpr:CPR_0261.
PATRIC	19488813. VBICloPer122123_0245.
TIGR	CPR_0261.
Phylogenomic databases
eggNOG	COG4624.
HOGENOM	HBG419594.
OMA	KIGFSDM.
ProtClustDB	CLSK883424.
Family and domain databases
InterPro	IPR001450. 4Fe4S-bd_dom. IPR017896. 4Fe4S_Fe-S-bd. IPR017900. 4Fe4S_Fe_S_CS. IPR009016. Fe_hydrogenase. IPR004108. Fe_hydrogenase_lsu_C. [Graphical view]
KO	K00532.
Pfam	PF02906. Fe_hyd_lg_C. 1 hit. PF00037. Fer4. 1 hit. [Graphical view]
SUPFAM	SSF53920. Fe_hydrog. 1 hit.
PROSITE	PS00198. 4FE4S_FER_1. 1 hit. PS51379. 4FE4S_FER_2. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0SWA8_CLOPS

Accession

Primary (citable) accession number: Q0SWA8

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)