Q0SVX5 (Q0SVX5_CLOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative glucuronyl hydrolase EMBL ABG87664.1

Gene names

Ordered Locus Names:

CPR_0396

Organism

Clostridium perfringens (strain SM101 / Type A) [Complete proteome] [HAMAP] EMBL ABG87664.1

Taxonomic identifier

289380 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	396 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABG87664.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0SVX5 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: D06BEA857BD063E3	FASTA	396	46,127
	10 20 30 40 50 60 MIKEIRVEEI AKKDEFLKTK LLTRAEVKNA IDLVIKQIDA NIEYFKDKFP SSATKNNEYG 70 80 90 100 110 120 IIENIEWTDG FWTGLLWLAY EYTGDEKYRE LADKNVASFK NRVEKDIELD HHDLGFLYSL 130 140 150 160 170 180 ATVSGYKLTG SEDAREASIK AANKLTSRYQ EKGEFIQAWG ELGRKDHYRF IIDCLLNILL 190 200 210 220 230 240 LYWASDETGD AKYRNIANKH FVTSCNNVIR DDASAFHTFY MDNETGKPLR GVTRQGYSDD 250 260 270 280 290 300 SAWARGQAWG VYGIPLNYRY TRNESCFNLY EGMTNYFLNR LPKDNVCYWD LIFNDGDDHS 310 320 330 340 350 360 KDSSAAAIAV CGMHEMNKYL PEVDENKEVY KYAMHNILRS LIENYMNPEI EPGKPVLLHG 370 380 390 VYSWHSGKGV DEGNIWGDYF FLEALIRFYK DWNLYW

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000312 Genomic DNA. Translation: ABG87664.1.
RefSeq	YP_697725.1. NC_008262.1.
3D structure databases
ProteinModelPortal	Q0SVX5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0SVX5.
Protein family/group databases
CAZy	GH88. Glycoside Hydrolase Family 88.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4206121.
GenomeReviews	Gene locus CPR_0396 in contig CP000312_GR.
KEGG	cpr:CPR_0396.
PATRIC	19489085. VBICloPer122123_0380.
TIGR	CPR_0396.
Phylogenomic databases
eggNOG	NOG04843.
HOGENOM	HBG428170.
OMA	KDYANKD.
ProtClustDB	CLSK797403.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR010905. Glyco_hydro_88. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
Pfam	PF07470. Glyco_hydro_88. 1 hit. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0SVX5_CLOPS

Accession

Primary (citable) accession number: Q0SVX5

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)