Q0SV83 (Q0SV83_CLOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
F5/8 type C domain protein EMBL ABG85652.1

Gene names

Ordered Locus Names:

CPR_0640

Organism

Clostridium perfringens (strain SM101 / Type A) [Complete proteome] [HAMAP] EMBL ABG85652.1

Taxonomic identifier

289380 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	436 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cell adhesion Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-L-fucosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0SV83 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 124667E1CE79A7B6	FASTA	436	50,478
	10 20 30 40 50 60 MNTTLANLTP TKEQRKYQED ELIAFLDLQM NTFTANSENN DEAPSLLKQE TSFNTDIWIE 70 80 90 100 110 120 NLFKFGFKKV ILTAKLNNGV CLWQSNCSKV NINTFSLENS YDDLVKKVSK SCKKFGLKFG 130 140 150 160 170 180 IHLTLKDYLT LNLTPEEYDN YYTSQLKELI TNYSQISEVI MDMTSLDEYY DSLDFERYFK 190 200 210 220 230 240 VIKEINPKCI ISSPIGPDVR WTYYSDIESS KNYFYSSINL NLLKEDFNNE EIRKGNIYGD 250 260 270 280 290 300 TWIVGESIYS LSDCLNHNKD SLSNLKHVYN NSLGRNTNLV LVLSPNTDGL LNHNELSLLS 310 320 330 340 350 360 DFSKYIKETF SNNLIKGSSI LATNSSSSDS YNLIDDYKKS YWIANENAVN PYIEIDFKTI 370 380 390 400 410 420 TEFNILEIRE WIAEGQNVEE FKVYAYNNSW FELYNGTSIG YRHIAKLNNI KTDKIKISFT 430 KYKNPPMINH IGAYLG

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000312 Genomic DNA. Translation: ABG85652.1.
RefSeq	YP_697967.1. NC_008262.1.
3D structure databases
ProteinModelPortal	Q0SV83.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0SV83.
Protein family/group databases
CAZy	GH29. Glycoside Hydrolase Family 29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4206453.
GenomeReviews	Gene locus CPR_0640 in contig CP000312_GR.
KEGG	cpr:CPR_0640.
PATRIC	19489573. VBICloPer122123_0618.
TIGR	CPR_0640.
Phylogenomic databases
eggNOG	COG3669.
HOGENOM	HBG061747.
OMA	WIANENA.
ProtClustDB	CLSK518712.
Family and domain databases
InterPro	IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008979. Galactose-bd-like. IPR000933. Glyco_hydro_29. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10030. Glyco_hydro_29. 1 hit.
Pfam	PF01120. Alpha_L_fucos. 1 hit. PF00754. F5_F8_type_C. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0SV83_CLOPS

Accession

Primary (citable) accession number: Q0SV83

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)