Q0STS0 (Q0STS0_CLOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Citrate lyase, alpha subunit EMBL ABG87411.1
EC=2.8.3.10 EMBL ABG87411.1

Gene names

Name:	citF EMBL ABG87411.1
Ordered Locus Names:	CPR_1165

Organism

Clostridium perfringens (strain SM101 / Type A) [Complete proteome] [HAMAP] EMBL ABG87411.1

Taxonomic identifier

289380 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	519 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABG87411.1 Transferase EMBL ABG87411.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	acetyl-CoA metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	citrate lyase complex Inferred from electronic annotation. Source: InterPro
Molecular function	citrate CoA-transferase activity Inferred from electronic annotation. Source: EC lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0STS0 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: E935FD52D9AFB8E7	FASTA	519	56,114
	10 20 30 40 50 60 MGINSININI PDDILKERKT VEFKGEFSLE PKGNIQGRKI TATFCGKNKK LSSIAESIEK 70 80 90 100 110 120 TGVKDGMTIS FHHHFRAGDY IIRMVMKEIA NLGIKDLNLC VSSLTSAHEF LIDYIKDGTV 130 140 150 160 170 180 TGIETSGIRG KLGEEISKGI MKKPVIIRSH GGRARAIEAG DTKIDVAFLG VPCSDDYGNA 190 200 210 220 230 240 NGIHGKSQCG SLGYAIIDSK YADKVVLITD TIMPYPNVPA SISQQDVDYI VEVEEIGDPN 250 260 270 280 290 300 GIASGATRFT KDPKELLIAK YASAVIEASG YLKDGFSIQA GTGGASLAVA RFLKEKMEEK 310 320 330 340 350 360 NIKASFGLGG ISKQFVDLHE EGFIGTLFDV QGFDLKAVES IGKNNKHVEI DASLYANPHN 370 380 390 400 410 420 KGCIANKLDI VILSALEVDK NFNVNVITGS DGYIRGASGG HSDTAAGAKL SMIVSPLVRG 430 440 450 460 470 480 RIPTVVDKVN TVITPGESID VIVTERGVAI NDKLSKNKEL KERLESNKNI PILSIEELHE 490 500 510 KALKITGTPE PIKYEDRVVG IIEYRDGSII DVIHKVKED

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000312 Genomic DNA. Translation: ABG87411.1.
RefSeq	YP_698487.1. NC_008262.1.
3D structure databases
ProteinModelPortal	Q0STS0.
SMR	Q0STS0. Positions 38-518.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0STS0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4206414.
GenomeReviews	Gene locus CPR_1165 in contig CP000312_GR.
KEGG	cpr:CPR_1165.
PATRIC	19490625. VBICloPer122123_1143.
TIGR	CPR_1165.
Phylogenomic databases
eggNOG	COG3051.
HOGENOM	HBG297040.
OMA	KGSVINQ.
ProtClustDB	CLSK874113.
Family and domain databases
InterPro	IPR006472. Citrate_lyase_asu. [Graphical view]
KO	K01643.
Pfam	PF04223. CitF. 1 hit. [Graphical view]
PIRSF	PIRSF009451. Citrt_lyas_alpha. 1 hit.
TIGRFAMs	TIGR01584. CitF. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0STS0_CLOPS

Accession

Primary (citable) accession number: Q0STS0

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)