Q0ST33 (Q0ST33_CLOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 38 EMBL ABG87409.1

Gene names

Ordered Locus Names:

CPR_1405

Organism

Clostridium perfringens (strain SM101 / Type A) [Complete proteome] [HAMAP] EMBL ABG87409.1

Taxonomic identifier

289380 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	859 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABG87409.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	mannose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-mannosidase activity Inferred from electronic annotation. Source: InterPro carbohydrate binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0ST33 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: D83C8DFBD94FF519	FASTA	859	98,300
	10 20 30 40 50 60 MKKVHVVSHS HWDREWYIPF QKHRVKLVDF MDSLINTLEN NEHFKYFHLD GQTIALDDYL 70 80 90 100 110 120 EIKPYMFHRL KKLIEEGRLH VGPWYVLQDE YLISAEANVR NMLLGMRFAK RFGNPVKIGY 130 140 150 160 170 180 FPDSFGNISQ APQILRGFGI DNAVFGRGIT PIAFDNQKVE EAGENEYHSE VLWKSPDGSE 190 200 210 220 230 240 VLGILMANWY SNGNEIPAGK KEAIEFLNDR VNKADMYATT NQILLMNGCD HQPVQTNVGD 250 260 270 280 290 300 IIDNVKEDVD FELVHSNLVQ YIEDVKKEVK DLKEVTGELN GQYTDGWWTL CNTASSRLYL 310 320 330 340 350 360 KQMNNKSQVL LERYVEPLGV MASLEGKKYE SDFILQAWKY LIQNHPHDSI CGCSIDEVHQ 370 380 390 400 410 420 DMVTRFKSSM QISEEMIARS TEHMLNLVNG TTTDRESIVV FNTLGWDRSE VVEATVDVNK 430 440 450 460 470 480 ESGIENFKVV TENGEEVPSV VEDLGETFKY TLPNNRFRQP EYVNRFKVKF LANNIKALGL 490 500 510 520 530 540 KSFKIVSCEK REEKEVSKDL TFENKFFSLK FNENGTFDLI HKGTNKEYKN LNAFEDCGDI 550 560 570 580 590 600 GDEYIFRAPK KDLVVNTLGN KASINILKDN EVEKVIEVKN TLEVPVKAIK KESRRVEEMT 610 620 630 640 650 660 EIKLVSTIIL SEISKRVDVK VEIENTAKDH RLRALFPTGI EASTHFTEGH FDVIERETTP 670 680 690 700 710 720 WEGWQNPSNC QKQTNFVDVN DGKVGLMIAN MGLPEYEVLR DGKNTIALTI LRSVGELGDW 730 740 750 760 770 780 GVFKTPEAQC LGNNVAEYSI IAHEGDYAGE RAYEEAYNLN TPMLALQGDF KKEDSLVSIK 790 800 810 820 830 840 GENVVLSAFK KAEEGDSIII RIFNISHKEE NFQIKVNRDV KEINEVNLNE ELIEKLEVKE 850 NAINGIISKK QIKTFEIVI

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000312 Genomic DNA. Translation: ABG87409.1.
RefSeq	YP_698724.1. NC_008262.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q0ST33.
Protein family/group databases
CAZy	GH38. Glycoside Hydrolase Family 38.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4206412.
GenomeReviews	Gene locus CPR_1405 in contig CP000312_GR.
KEGG	cpr:CPR_1405.
PATRIC	19491101. VBICloPer122123_1380.
TIGR	CPR_1405.
Phylogenomic databases
eggNOG	COG0383.
HOGENOM	HBG532911.
OMA	DNAVFGR.
ProtClustDB	CLSK2518639.
Family and domain databases
InterPro	IPR011013. Glyco_hydro-type_carb-bd. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR013780. Glyco_hydro_13_b. IPR011682. Glyco_hydro_38_C. IPR015341. Glyco_hydro_38_cen_dom. IPR000602. Glyco_hydro_38_core. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.110.10. Glyco_hydro_38_core. 1 hit.
KO	K15524.
Pfam	PF09261. Alpha-mann_mid. 1 hit. PF01074. Glyco_hydro_38. 1 hit. PF07748. Glyco_hydro_38C. 1 hit. [Graphical view]
SMART	SM00872. Alpha-mann_mid. 1 hit. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 1 hit. SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0ST33_CLOPS

Accession

Primary (citable) accession number: Q0ST33

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)