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Q0SSN2

- GLGB2_CLOPS

UniProt

Q0SSN2 - GLGB2_CLOPS

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Protein
1,4-alpha-glucan branching enzyme GlgB 2
Gene
glgB2, CPR_1559
Organism
Clostridium perfringens (strain SM101 / Type A)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei337 – 3371Nucleophile By similarity
Active sitei390 – 3901Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciCPER289380:GI76-1571-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB 2 (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 2
Alpha-(1->4)-glucan branching enzyme 2
Glycogen branching enzyme 2
Short name:
BE 2
Gene namesi
Name:glgB2
Ordered Locus Names:CPR_1559
OrganismiClostridium perfringens (strain SM101 / Type A)
Taxonomic identifieri289380 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000001824: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6596591,4-alpha-glucan branching enzyme GlgB 2UniRule annotation
PRO_0000260647Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi289380.CPR_1559.

Structurei

3D structure databases

ProteinModelPortaliQ0SSN2.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiFERTEND.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 2 hits.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0SSN2-1 [UniParc]FASTAAdd to Basket

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MRNYKELKHE KNGNVTEKIG ENKGKSKKMS KDESLLSFDL FLEGKEHSAY    50
KFMGAHFITE NRKRGVRFTT WSPRASKIYI IGDFNNWELK EEYSMKKINE 100
RGIWSLFIPK LEEGIKYKFA VENECGNNTV YKSDPYAFKS ELRPNTASVL 150
TKIKSFRWGD KRWLNKREKE GLDNKPMNIY ELHLGSWKRK DGEFMTYEEI 200
SEVLVEYIKE MGYTHVEFMP VNEHPLDASW GYQGVGYYSV TSRYGDLNGL 250
KTLINKLHKN NIGVLLDWVP SHFCKDEHGL FMFDGSPTYE YEVWWKANNE 300
GWGTCNFDLG RPEVKSFLFS NAMYWINEFH VDGLRVDAVS NMLYLDYGRE 350
YGEWEPNIYG ENGNLEAIAF LKELNTIIKK EGKGAITVAE ESTSWEGITK 400
SVEEGGLGFD YKWNMGWMND TLSYIELDPI YRKYHHNKMN FSMMYNYSEK 450
FILPISHDEV VHGKKSLINK MWGDDWKKYA GLRLYASFMM GHPGKKLMFM 500
GCEFGQFVEW REWEELQWSV IEEFDIHRKT KEYFKALNKF YLENSSLWSL 550
DYEEEGFKWM DADNSEESVL SFIRIGKNKK EKLIFICNFT PEVYYDFKVG 600
VPELGEYVEV FNSDSLEFGG VGNIMGDSIL KATEESFKDF DYSISVKVPP 650
LGTLVLKVK 659
Length:659
Mass (Da):77,293
Last modified:September 5, 2006 - v1
Checksum:i7F740EA80B703BCD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000312 Genomic DNA. Translation: ABG87715.1.
RefSeqiYP_698875.1. NC_008262.1.

Genome annotation databases

EnsemblBacteriaiABG87715; ABG87715; CPR_1559.
GeneIDi4206055.
KEGGicpr:CPR_1559.
PATRICi19491408. VBICloPer122123_1533.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000312 Genomic DNA. Translation: ABG87715.1 .
RefSeqi YP_698875.1. NC_008262.1.

3D structure databases

ProteinModelPortali Q0SSN2.
ModBasei Search...

Protein-protein interaction databases

STRINGi 289380.CPR_1559.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG87715 ; ABG87715 ; CPR_1559 .
GeneIDi 4206055.
KEGGi cpr:CPR_1559.
PATRICi 19491408. VBICloPer122123_1533.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi FERTEND.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci CPER289380:GI76-1571-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 2 hits.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SM101 / Type A.

Entry informationi

Entry nameiGLGB2_CLOPS
AccessioniPrimary (citable) accession number: Q0SSN2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: September 5, 2006
Last modified: June 11, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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