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Protein

Ribosomal RNA small subunit methyltransferase H

Gene

rsmH

Organism
Clostridium perfringens (strain SM101 / Type A)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + cytosine(1402) in 16S rRNA = S-adenosyl-L-homocysteine + N4-methylcytosine(1402) in 16S rRNA.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei53S-adenosyl-L-methionineUniRule annotation1
Binding sitei83S-adenosyl-L-methionine; via amide nitrogenUniRule annotation1
Binding sitei100S-adenosyl-L-methionineUniRule annotation1
Binding sitei107S-adenosyl-L-methionineUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferase, Transferase
Biological processrRNA processing
LigandS-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase HUniRule annotation (EC:2.1.1.199UniRule annotation)
Alternative name(s):
16S rRNA m(4)C1402 methyltransferaseUniRule annotation
rRNA (cytosine-N(4)-)-methyltransferase RsmHUniRule annotation
Gene namesi
Name:rsmHUniRule annotation
Synonyms:mraW
Ordered Locus Names:CPR_1833
OrganismiClostridium perfringens (strain SM101 / Type A)
Taxonomic identifieri289380 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000001824 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000628241 – 310Ribosomal RNA small subunit methyltransferase HAdd BLAST310

Structurei

3D structure databases

ProteinModelPortaliQ0SRV9
SMRiQ0SRV9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni33 – 35S-adenosyl-L-methionine bindingUniRule annotation3

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmH family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000049777
KOiK03438
OMAiKKIHPAT

Family and domain databases

Gene3Di1.10.150.170, 1 hit
HAMAPiMF_01007 16SrRNA_methyltr_H, 1 hit
InterProiView protein in InterPro
IPR002903 RsmH
IPR023397 SAM-dep_MeTrfase_MraW_recog
IPR029063 SAM-dependent_MTases
PANTHERiPTHR11265 PTHR11265, 1 hit
PfamiView protein in Pfam
PF01795 Methyltransf_5, 1 hit
PIRSFiPIRSF004486 MraW, 1 hit
SUPFAMiSSF53335 SSF53335, 2 hits
SSF81799 SSF81799, 1 hit
TIGRFAMsiTIGR00006 TIGR00006, 1 hit

Sequencei

Sequence statusi: Complete.

Q0SRV9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEFKHVSVLL DECINALNIK EDGIYVDCTL GGAGHSSEIV KRLSSDGRLI
60 70 80 90 100
GFDQDKDALK AAGERLKDYK NVTYVHSNFY AIYDVLTDLG IDGVDGILMD
110 120 130 140 150
LGVSSYQLDN GERGFSYMQD APLDMRMNRE NEFSAYEIVN TYSEEELYRI
160 170 180 190 200
IKEYGEEKFA KRIASFIVKN REEKNIETTL ELVEIIKAAI PAKARREGPH
210 220 230 240 250
PAKRTFQAIR IEVNKELEII SKTILDGVKK LNKGGRMAII TFHSLEDRIV
260 270 280 290 300
KNTFKELANP CTCPSEFPVC VCNRKPEVKL ISRKPIEASK EELEFNPRSR
310
SAKLRIIEKL
Length:310
Mass (Da):35,248
Last modified:September 5, 2006 - v1
Checksum:iE5D68D775402B407
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000312 Genomic DNA Translation: ABG87100.1
RefSeqiWP_003451137.1, NC_008262.1

Genome annotation databases

EnsemblBacteriaiABG87100; ABG87100; CPR_1833
GeneIDi29570775
KEGGicpr:CPR_1833

Similar proteinsi

Entry informationi

Entry nameiRSMH_CLOPS
AccessioniPrimary (citable) accession number: Q0SRV9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: September 5, 2006
Last modified: May 23, 2018
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

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