Q0SRV0 (Q0SRV0_CLOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
FucA EMBL ABG87548.1
EC=3.2.1.51 EMBL ABG87548.1

Gene names

Ordered Locus Names:

CPR_1843

Organism

Clostridium perfringens (strain SM101 / Type A) [Complete proteome] [HAMAP] EMBL ABG87548.1

Taxonomic identifier

289380 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	750 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABG87548.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cell adhesion Inferred from electronic annotation. Source: InterPro cell communication Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-L-fucosidase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0SRV0 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 32DC8E4B78B3F731	FASTA	750	83,805
	10 20 30 40 50 60 MKVKAIKSFL ITTMAMTFLV SMGQGSILTK ANTINNMEYV TEVFGAIPTE EQVSYQKEEL 70 80 90 100 110 120 TAFIHFGVNT FTGREWGDGT ENPEIFNPTN LDADQWVKTL AEAGFGRVIL TAKHHDGFCL 130 140 150 160 170 180 WDSAYTKHDV ASSPWKNGKG DVVKEVLEAC AKYNIKFGVY LSPWDQNSEH YGDGNGGDYN 190 200 210 220 230 240 EFYMNQLREL LTNYGPIAEV WMDGAKGSNV KQEYNFEEWF ALIKKLQPEC LIFSPQGPDI 250 260 270 280 290 300 RWIGNEKGYA GEPCWSTIDI EKMKERENPT YLNNGEEGGP NWIVGESDVS IRPGWFYHES 310 320 330 340 350 360 QDNEVKSLEK MMDIYFKSIG RNSVLLLNVP PNKEGKLHEN DVNRLKKFGE TIKELFNDDL 370 380 390 400 410 420 ALNKEVIVDG FANNDETYGA NKIVDGDYDT YWAPDNSSKT GTIEIDLGGS KEFDVISLQE 430 440 450 460 470 480 YIPLGQRVSS FNVEVLQGEN WNKVYEGKTI GYKRLVRIAP TKGEKIRINI TGSLEVPLIN 490 500 510 520 530 540 NVGVYKQPIS IELPSGPPAG LKVLNDDNKG NELEQFNFSD GWIYETIHGE DDLGGDAHYT 550 560 570 580 590 600 SKINATVNIK FKGTKFFLSG TKDSGHGIME ISIDGENPVE VDLYSPNRKS KEIVFESEDL 610 620 630 640 650 660 SDGEHEVTVK CTGRKNSNSR GIVAHIDGAY VLDNGGKGMV EFEKVGYKVS ENIGTATFKV 670 680 690 700 710 720 IRKGGSNGKL EVNYDTLAGT ALNGVDYQTW SGTLAFNEGE TEKTFDITII DDKEKEEPKE 730 740 750 FYLKLSDPIG GILGFNSRAT VIINDDEQIK

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000312 Genomic DNA. Translation: ABG87548.1.
RefSeq	YP_699157.1. NC_008262.1.
3D structure databases
ProteinModelPortal	Q0SRV0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0SRV0.
Protein family/group databases
CAZy	GH29. Glycoside Hydrolase Family 29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4206239.
GenomeReviews	Gene locus CPR_1843 in contig CP000312_GR.
KEGG	cpr:CPR_1843.
PATRIC	19491989. VBICloPer122123_1822.
TIGR	CPR_1843.
Phylogenomic databases
eggNOG	COG3669.
HOGENOM	HBG061610.
OMA	IRINITG.
ProtClustDB	CLSK519264.
Family and domain databases
InterPro	IPR003644. Calx_beta. IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008979. Galactose-bd-like. IPR000933. Glyco_hydro_29. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01206.
PANTHER	PTHR10030. Glyco_hydro_29. 1 hit.
Pfam	PF01120. Alpha_L_fucos. 1 hit. PF03160. Calx-beta. 1 hit. PF00754. F5_F8_type_C. 1 hit. [Graphical view]
SMART	SM00812. Alpha_L_fucos. 1 hit. SM00237. Calx_beta. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0SRV0_CLOPS

Accession

Primary (citable) accession number: Q0SRV0

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)