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Protein

Superoxide dismutase

Gene

sodA

Organism
Borrelia afzelii (strain PKo)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:BafPKo_0150Imported, BAPKO_0154Imported
OrganismiBorrelia afzelii (strain PKo)Imported
Taxonomic identifieri390236 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeBorreliaBorrelia burgdorferi group
ProteomesiUP000001825 Componenti: Chromosome UP000005216 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi390236.BAPKO_0154.

Structurei

3D structure databases

ProteinModelPortaliQ0SP12.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013583.
KOiK04564.
OMAiKHHNAYT.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0SP12-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKLPELGYN YDAVEPYIDA KTMEIHHSKH HNGFVINLNS ILEKMGKSHL
60 70 80 90 100
EDVSNILINI HDFPDEFQTP IRNNAGGYSN HTLYFRTLKP GNKSNLLEKF
110 120 130 140 150
ENDINVTFGS LDVLKASLKD TAMKIFGSGW AWLVLCPDSG LKVISMPNQD
160 170 180 190 200
SPLMKSYKPV LGIDVWEHAY YLKYQNRRIE YVDAFLKALN WEEVSKIYNE

AHN
Length:203
Mass (Da):23,398
Last modified:September 5, 2006 - v1
Checksum:iE3F7C43C58F24FB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000395 Genomic DNA. Translation: ABH01416.1.
CP002933 Genomic DNA. Translation: AEL69383.1.
RefSeqiYP_005592373.1. NC_017238.1.
YP_709592.1. NC_008277.1.

Genome annotation databases

EnsemblBacteriaiABH01416; ABH01416; BAPKO_0154.
AEL69383; AEL69383; BafPKo_0150.
GeneIDi12159105.
4227435.
KEGGibaf:BAPKO_0154.
bafz:BafPKo_0150.
PATRICi37188597. VBIBorAfz3878_0216.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000395 Genomic DNA. Translation: ABH01416.1.
CP002933 Genomic DNA. Translation: AEL69383.1.
RefSeqiYP_005592373.1. NC_017238.1.
YP_709592.1. NC_008277.1.

3D structure databases

ProteinModelPortaliQ0SP12.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi390236.BAPKO_0154.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABH01416; ABH01416; BAPKO_0154.
AEL69383; AEL69383; BafPKo_0150.
GeneIDi12159105.
4227435.
KEGGibaf:BAPKO_0154.
bafz:BafPKo_0150.
PATRICi37188597. VBIBorAfz3878_0216.

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013583.
KOiK04564.
OMAiKHHNAYT.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Comparative genome analysis: Selection pressure on the Borrelia vls cassettes is essential for infectivity."
    Gloeckner G., Schulte-Spechtel U., Schilhabel M.B., Felder M., Suehnel J., Wilske B., Platzer M.
    Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PKoImported.
  2. "Whole-genome sequences of two Borrelia afzelii and two Borrelia garinii Lyme disease agent isolates."
    Casjens S.R., Mongodin E.F., Qiu W.G., Dunn J.J., Luft B.J., Fraser-Liggett C.M., Schutzer S.E.
    J. Bacteriol. 193:6995-6996(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PKoImported.

Entry informationi

Entry nameiQ0SP12_BORAP
AccessioniPrimary (citable) accession number: Q0SP12
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: January 7, 2015
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.