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Protein
Submitted name:

Thymidine kinase

Gene

tdk

Organism
Borrelia afzelii (strain PKo)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. thymidine kinase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

KinaseImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Thymidine kinaseImported
Gene namesi
Name:tdkImported
Ordered Locus Names:BafPKo_0819Imported, BAPKO_0843Imported
OrganismiBorrelia afzelii (strain PKo)Imported
Taxonomic identifieri390236 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeBorreliaBorrelia burgdorferi group
ProteomesiUP000001825: Chromosome, UP000005216: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi390236.BAPKO_0843.

Structurei

3D structure databases

ProteinModelPortaliQ0SM61.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1435.
HOGENOMiHOG000221398.
KOiK00857.
OMAiLGAYCEH.
OrthoDBiEOG6C8MTG.

Family and domain databases

InterProiIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
[Graphical view]
PfamiPF00265. TK. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0SM61-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGFCLDFANK EDAKLNNIVS ISHFDFKVKI NLILVVGPMG SGKTEYAAKI
60 70 80 90 100
YKDSLVVRKK SFKVLGNIIK GNRSRVNVFF IRNFLDKRRF QDFPENVIPY
110 120 130 140 150
RGGGKDRIDE IGFASSSFDI EKLIASNPSC GTFIIDEACF YDERLIFVLN
160 170 180 190 200
KISLNENILF ILPTLLYNFR KESFNDTAKL LVEYSDKIYK LGAYCGHIDC
210 220 230 240 250
MEESFFSYRY YFYNNKEIPA PYFDPLLIVG GDEEIESAIY PNYATRCSMH
260 270 280 290 300
HYLVGKEYFF SFLKPFALLY SQGDKKFLEN EIVALSTDVE NSNFVNSLDS
310 320 330 340 350
ERAYEFRDEI LRNILELPFL AERALITLFS EYSILSKDNF KDLVFKFSLN
360
KDYINKIFFS KEGKEIF
Length:367
Mass (Da):42,669
Last modified:September 5, 2006 - v1
Checksum:iB584A8666BF8ECED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000395 Genomic DNA. Translation: ABH02067.1.
CP002933 Genomic DNA. Translation: AEL70008.1.
RefSeqiYP_005592998.1. NC_017238.1.
YP_710243.1. NC_008277.1.

Genome annotation databases

EnsemblBacteriaiABH02067; ABH02067; BAPKO_0843.
AEL70008; AEL70008; BafPKo_0819.
GeneIDi12158913.
4227328.
KEGGibaf:BAPKO_0843.
bafz:BafPKo_0819.
PATRICi37189935. VBIBorAfz3878_0848.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000395 Genomic DNA. Translation: ABH02067.1.
CP002933 Genomic DNA. Translation: AEL70008.1.
RefSeqiYP_005592998.1. NC_017238.1.
YP_710243.1. NC_008277.1.

3D structure databases

ProteinModelPortaliQ0SM61.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi390236.BAPKO_0843.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABH02067; ABH02067; BAPKO_0843.
AEL70008; AEL70008; BafPKo_0819.
GeneIDi12158913.
4227328.
KEGGibaf:BAPKO_0843.
bafz:BafPKo_0819.
PATRICi37189935. VBIBorAfz3878_0848.

Phylogenomic databases

eggNOGiCOG1435.
HOGENOMiHOG000221398.
KOiK00857.
OMAiLGAYCEH.
OrthoDBiEOG6C8MTG.

Family and domain databases

InterProiIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
[Graphical view]
PfamiPF00265. TK. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Comparative genome analysis: Selection pressure on the Borrelia vls cassettes is essential for infectivity."
    Gloeckner G., Schulte-Spechtel U., Schilhabel M.B., Felder M., Suehnel J., Wilske B., Platzer M.
    Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PKoImported.
  2. "Whole-genome sequences of two Borrelia afzelii and two Borrelia garinii Lyme disease agent isolates."
    Casjens S.R., Mongodin E.F., Qiu W.G., Dunn J.J., Luft B.J., Fraser-Liggett C.M., Schutzer S.E.
    J. Bacteriol. 193:6995-6996(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PKoImported.

Entry informationi

Entry nameiQ0SM61_BORAP
AccessioniPrimary (citable) accession number: Q0SM61
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: February 4, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.