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Protein
Submitted name:

Haloacid dehalogenase

Gene

RHA1_ro00230

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. (S)-2-haloacid dehalogenase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-230-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Haloacid dehalogenaseImported (EC:3.8.1.2Imported)
Gene namesi
Ordered Locus Names:RHA1_ro00230Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
ProteomesiUP000008710 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ0SK70.

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro00230.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3UMGX-ray2.25A/B/C/D/E/F/G/H1-254[»]
ProteinModelPortaliQ0SK70.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1011.
HOGENOMiHOG000248340.
KOiK01560.
OMAiMVAAHNN.
OrthoDBiEOG6TN44Q.

Family and domain databases

Gene3Di3.40.50.1000. 1 hit.
InterProiIPR023214. HAD-like_dom.
IPR006439. HAD-SF_hydro_IA.
IPR006328. HAD_II.
[Graphical view]
PfamiPF13419. HAD_2. 1 hit.
[Graphical view]
PRINTSiPR00413. HADHALOGNASE.
SUPFAMiSSF56784. SSF56784. 1 hit.
TIGRFAMsiTIGR01493. HAD-SF-IA-v2. 1 hit.
TIGR01428. HAD_type_II. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0SK70-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGVPFRSPS TGRNVRAVLF DTFGTVVDWR TGIATAVADY AARHQLEVDA
60 70 80 90 100
VAFADRWRAR YQPSMDAILS GAREFVTLDI LHRENLDFVL RESGIDPTNH
110 120 130 140 150
DSGELDELAR AWHVLTPWPD SVPGLTAIKA EYIIGPLSNG NTSLLLDMAK
160 170 180 190 200
NAGIPWDVII GSDINRKYKP DPQAYLRTAQ VLGLHPGEVM LAAAHNGDLE
210 220 230 240 250
AAHATGLATA FILRPVEHGP HQTDDLAPTG SWDISATDIT DLAAQLRAGS

TGFR
Length:254
Mass (Da):27,526
Last modified:September 5, 2006 - v1
Checksum:iD33ACD105AABF5DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG92066.1.
RefSeqiYP_700224.1. NC_008268.1.

Genome annotation databases

EnsemblBacteriaiABG92066; ABG92066; RHA1_ro00230.
KEGGirha:RHA1_ro00230.
PATRICi23199265. VBIRhoJos26306_0258.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG92066.1.
RefSeqiYP_700224.1. NC_008268.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3UMGX-ray2.25A/B/C/D/E/F/G/H1-254[»]
ProteinModelPortaliQ0SK70.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi101510.RHA1_ro00230.

Proteomic databases

PRIDEiQ0SK70.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG92066; ABG92066; RHA1_ro00230.
KEGGirha:RHA1_ro00230.
PATRICi23199265. VBIRhoJos26306_0258.

Phylogenomic databases

eggNOGiCOG1011.
HOGENOMiHOG000248340.
KOiK01560.
OMAiMVAAHNN.
OrthoDBiEOG6TN44Q.

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-230-MONOMER.

Family and domain databases

Gene3Di3.40.50.1000. 1 hit.
InterProiIPR023214. HAD-like_dom.
IPR006439. HAD-SF_hydro_IA.
IPR006328. HAD_II.
[Graphical view]
PfamiPF13419. HAD_2. 1 hit.
[Graphical view]
PRINTSiPR00413. HADHALOGNASE.
SUPFAMiSSF56784. SSF56784. 1 hit.
TIGRFAMsiTIGR01493. HAD-SF-IA-v2. 1 hit.
TIGR01428. HAD_type_II. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RHA1Imported.
  2. "Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination."
    Chan P.W.Y., To T.K.W., Petit P., Tran C., Waelti M., Savchenko A., Yakunin A.F., Edwards E.A., Pai E.F.
    Submitted (OCT-2011) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.25 ANGSTROMS).

Entry informationi

Entry nameiQ0SK70_RHOJR
AccessioniPrimary (citable) accession number: Q0SK70
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: April 1, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.