Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q0SK70 (Q0SK70_RHOSR) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=3.8.1.2 EMBL ABG92066.1
Gene names
Ordered Locus Names:RHA1_ro00230 EMBL ABG92066.1
OrganismRhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP] EMBL ABG92066.1
Taxonomic identifier101510 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus

Protein attributes

Sequence length254 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   LigandChloride PDB 3UMG
   Molecular functionHydrolase EMBL ABG92066.1
   Technical term3D-structure PDB 3UMG
Complete proteome
Gene Ontology (GO)
   Molecular_function(S)-2-haloacid dehalogenase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Binding site1381Chloride PDB 3UMG

Sequences

Sequence LengthMass (Da)Tools
Q0SK70 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: D33ACD105AABF5DB

FASTA25427,526
        10         20         30         40         50         60 
MAGVPFRSPS TGRNVRAVLF DTFGTVVDWR TGIATAVADY AARHQLEVDA VAFADRWRAR 

        70         80         90        100        110        120 
YQPSMDAILS GAREFVTLDI LHRENLDFVL RESGIDPTNH DSGELDELAR AWHVLTPWPD 

       130        140        150        160        170        180 
SVPGLTAIKA EYIIGPLSNG NTSLLLDMAK NAGIPWDVII GSDINRKYKP DPQAYLRTAQ 

       190        200        210        220        230        240 
VLGLHPGEVM LAAAHNGDLE AAHATGLATA FILRPVEHGP HQTDDLAPTG SWDISATDIT 

       250 
DLAAQLRAGS TGFR 

« Hide

References

« Hide 'large scale' references
[1]"The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse."
McLeod M.P., Warren R.L., Hsiao W.W.L., Araki N., Myhre M., Fernandes C., Miyazawa D., Wong W., Lillquist A.L., Wang D., Dosanjh M., Hara H., Petrescu A., Morin R.D., Yang G., Stott J.M., Schein J.E., Shin H. expand/collapse author list , Smailus D., Siddiqui A.S., Marra M.A., Jones S.J.M., Holt R., Brinkman F.S.L., Miyauchi K., Fukuda M., Davies J.E., Mohn W.W., Eltis L.D.
Proc. Natl. Acad. Sci. U.S.A. 103:15582-15587(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RHA1.
[2]"Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination."
Chan P.W.Y., To T.K.W., Petit P., Tran C., Waelti M., Savchenko A., Yakunin A.F., Edwards E.A., Pai E.F.
Submitted (NOV-2011) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.25 ANGSTROMS) IN COMPLEX WITH CHLORIDE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000431 Genomic DNA. Translation: ABG92066.1.
RefSeqYP_700224.1. NC_008268.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3UMGX-ray2.25A/B/C/D/E/F/G/H1-254[»]
ProteinModelPortalQ0SK70.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING101510.RHA1_ro00230.

Proteomic databases

PRIDEQ0SK70.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG92066; ABG92066; RHA1_ro00230.
GeneID4217747.
KEGGrha:RHA1_ro00230.
PATRIC23199265. VBIRhoJos26306_0258.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1011.
HOGENOMHOG000248340.
KOK01560.
OMAMVAAHNN.
OrthoDBEOG6TN44Q.
ProtClustDBCLSK2468529.

Enzyme and pathway databases

BioCycRJOS101510:GJJ1-230-MONOMER.

Family and domain databases

Gene3D3.40.50.1000. 1 hit.
InterProIPR023214. HAD-like_dom.
IPR006439. HAD-SF_hydro_IA.
IPR006328. HAD_II.
[Graphical view]
PfamPF13419. HAD_2. 1 hit.
[Graphical view]
PRINTSPR00413. HADHALOGNASE.
SUPFAMSSF56784. SSF56784. 1 hit.
TIGRFAMsTIGR01493. HAD-SF-IA-v2. 1 hit.
TIGR01428. HAD_type_II. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0SK70_RHOSR
AccessionPrimary (citable) accession number: Q0SK70
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: December 11, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)