Q0SGT5 (Q0SGT5_RHOSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
tRNA nucleotidyltransferase EMBL ABG93251.1
EC=2.7.7.56 EMBL ABG93251.1

Gene names

Ordered Locus Names:

RHA1_ro01433 EMBL ABG93251.1

Organism

Rhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP] EMBL ABG93251.1

Taxonomic identifier

101510 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus › Rhodococcus jostii

Protein attributes

Sequence length	262 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity. SAAS SAAS002381
Catalytic activity	tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate. SAAS SAAS002381

Ontologies

Keywords
Biological process	tRNA processing SAAS SAAS002381
Molecular function	Nucleotidyltransferase SAAS SAAS002381 EMBL ABG93251.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tRNA processing Inferred from electronic annotation. Source: HAMAP
Molecular_function	tRNA binding Inferred from electronic annotation. Source: HAMAP tRNA nucleotidyltransferase activity Inferred from electronic annotation. Source: HAMAP tRNA-specific ribonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0SGT5 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 86286BAF78660D5D	FASTA	262	27,720
	10 20 30 40 50 60 MTTREDGRAD DELREVKITR GFTTHPAGSV LVEFGNTRVM CTASVEDGVP RWRQGSGLGW 70 80 90 100 110 120 LTAEYAMLPA ATHTRSGRES VKGKVGGRTQ EISRLVGRSL RACIDLAAIG ENTIALDCDV 130 140 150 160 170 180 LQADGGTRTA AITGAYVALV DAVTYLRAAG RLADPQPISC GIAAVSVGVV DGRVRLDLPY 190 200 210 220 230 240 EEDSRAEVDM NVVATDTGTL VEIQGTGEGA TFPRSTLDKL LDSALAGCEQ LFEIQKAALE 250 260 LPYPGALPEP KVPETSKKKF GG

References

[1]

"The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse." McLeod M.P., Warren R.L., Hsiao W.W.L., Araki N., Myhre M., Fernandes C., Miyazawa D., Wong W., Lillquist A.L., Wang D., Dosanjh M., Hara H., Petrescu A., Morin R.D., Yang G., Stott J.M., Schein J.E., Shin H. , Smailus D., Siddiqui A.S., Marra M.A., Jones S.J.M., Holt R., Brinkman F.S.L., Miyauchi K., Fukuda M., Davies J.E., Mohn W.W., Eltis L.D. Proc. Natl. Acad. Sci. U.S.A. 103:15582-15587(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RHA1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000431 Genomic DNA. Translation: ABG93251.1.
RefSeq	YP_701409.1. NC_008268.1.
3D structure databases
ProteinModelPortal	Q0SGT5.
SMR	Q0SGT5. Positions 4-248.
ModBase	Search...
Protein-protein interaction databases
STRING	101510.RHA1_ro01433.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG93251; ABG93251; RHA1_ro01433.
GeneID	4218383.
KEGG	rha:RHA1_ro01433.
PATRIC	23201689. VBIRhoJos26306_1455.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0689.
HOGENOM	HOG000229516.
KO	K00989.
OMA	MLPRATG.
ProtClustDB	PRK00173.
Enzyme and pathway databases
BioCyc	RJOS101510:GJJ1-1432-MONOMER.
Family and domain databases
HAMAP	MF_00564. RNase_PH.
InterPro	IPR001247. ExoRNase_PH_dom1. IPR015847. ExoRNase_PH_dom2. IPR020568. Ribosomal_S5_D2-typ_fold. IPR002381. RNase_PH_bac-type. IPR018336. RNase_PH_CS. [Graphical view]
Pfam	PF01138. RNase_PH. 1 hit. PF03725. RNase_PH_C. 1 hit. [Graphical view]
SUPFAM	SSF55666. 3_ExoRNase. 1 hit. SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
TIGRFAMs	TIGR01966. RNasePH. 1 hit.
PROSITE	PS01277. RIBONUCLEASE_PH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0SGT5_RHOSR

Accession

Primary (citable) accession number: Q0SGT5

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	May 1, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)