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Q0SGT5 (Q0SGT5_RHOSR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribonuclease PH HAMAP MF_00564
Short name=RNase PH HAMAP MF_00564
EC=2.7.7.56 HAMAP MF_00564
Alternative name(s):
tRNA nucleotidyltransferase HAMAP MF_00564
Gene names
Name:rph HAMAP MF_00564
Ordered Locus Names:RHA1_ro01433
OrganismRhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP] EMBL ABG93251.1
Taxonomic identifier101510 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length262 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity. HAMAP MF_00564

Catalytic activity

tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate. HAMAP MF_00564

Sequence similarities

Belongs to the RNase PH family. HAMAP MF_00564

Sequences

Sequence LengthMass (Da)Tools
Q0SGT5 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: 86286BAF78660D5D

FASTA26227,720
        10         20         30         40         50         60 
MTTREDGRAD DELREVKITR GFTTHPAGSV LVEFGNTRVM CTASVEDGVP RWRQGSGLGW 

        70         80         90        100        110        120 
LTAEYAMLPA ATHTRSGRES VKGKVGGRTQ EISRLVGRSL RACIDLAAIG ENTIALDCDV 

       130        140        150        160        170        180 
LQADGGTRTA AITGAYVALV DAVTYLRAAG RLADPQPISC GIAAVSVGVV DGRVRLDLPY 

       190        200        210        220        230        240 
EEDSRAEVDM NVVATDTGTL VEIQGTGEGA TFPRSTLDKL LDSALAGCEQ LFEIQKAALE 

       250        260 
LPYPGALPEP KVPETSKKKF GG

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000431 Genomic DNA. Translation: ABG93251.1.
RefSeqYP_701409.1. NC_008268.1.

3D structure databases

ProteinModelPortalQ0SGT5.
SMRQ0SGT5. Positions 4-248.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0SGT5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4218383.
GenomeReviewsGene locus RHA1_ro01433 in contig CP000431_GR.
KEGGrha:RHA1_ro01433.
PATRIC23201689. VBIRhoJos26306_1455.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0689.
HOGENOMHBG737187.
OMAMLPRATG.
PhylomeDBQ0SGT5.
ProtClustDBPRK00173.

Enzyme and pathway databases

BioCycRSP101510:RHA1_RO01433-MONOMER.

Family and domain databases

HAMAPMF_00564. RNase_PH.
[Tree]
InterProIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view]
KOK00989.
PfamPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMSSF55666. 3_ExoRNase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
TIGRFAMsTIGR01966. RNasePH. 1 hit.
PROSITEPS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0SGT5_RHOSR
AccessionPrimary (citable) accession number: Q0SGT5
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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