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Q0SDM7 (Q0SDM7_RHOSR) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Probable bacterial lipocalin protein EMBL ABG94359.1
Gene names
Ordered Locus Names:RHA1_ro02554 EMBL ABG94359.1
OrganismRhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP] EMBL ABG94359.1
Taxonomic identifier101510 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus ›

Protein attributes

Sequence length258 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q0SDM7 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: F376709D46E85DBD

FASTA25827,198
        10         20         30         40         50         60 
MSTIDRHSER SPERMGGTFS RIGPSDPEVA SNAPREGAAQ ALCSGCPFRR RMIVKGPEMR 

        70         80         90        100        110        120 
LSKARGFAAG LLTAAAAVVL AASPAQAQPG ALAPVPSLDV PRYLGTWYQL AAVPQPFNLD 

       130        140        150        160        170        180 
CARDTRATYG LVDSSNVSVA NSCTTWAGGT NGINGNARVN DPVTNAQLHV SFPDVPFQSS 

       190        200        210        220        230        240 
PDGPTNYVVT YIADDYSWAL VGDPARASGF VLSRNPAVDD AGWTQIRQVV ESRGYNSCLL 

       250 
LTSPTTGGRE GIQPLCTV

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000431 Genomic DNA. Translation: ABG94359.1.
RefSeqYP_702517.1. NC_008268.1.

3D structure databases

ProteinModelPortalQ0SDM7.
ModBaseSearch...

Protein-protein interaction databases

STRING101510.RHA1_ro02554.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG94359; ABG94359; RHA1_ro02554.
GeneID4220106.
KEGGrha:RHA1_ro02554.
PATRIC23203971. VBIRhoJos26306_2585.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3040.
HOGENOMHOG000061523.
KOK03098.
OMACARDTRA.
ProtClustDBCLSK758274.

Enzyme and pathway databases

BioCycRJOS101510:GJJ1-2552-MONOMER.

Family and domain databases

Gene3D2.40.128.20. 1 hit.
InterProIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
[Graphical view]
PfamPF08212. Lipocalin_2. 1 hit.
[Graphical view]
SUPFAMSSF50814. Calycin. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0SDM7_RHOSR
AccessionPrimary (citable) accession number: Q0SDM7
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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