Q0S9D9 (Q0S9D9_RHOSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL ABG95847.1

Gene names

Ordered Locus Names:

RHA1_ro04050 EMBL ABG95847.1

Organism

Rhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP] EMBL ABG95847.1

Taxonomic identifier

101510 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus › Rhodococcus jostii

Protein attributes

Sequence length	714 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	N-acetylmuramoyl-L-alanine amidase activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0S9D9 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 0D806FEA56937C7C	FASTA	714	72,659
	10 20 30 40 50 60 MPHRRPKPSI VLGAVAALAV ASPVAVYGIS SAPSDVKSTN ETSNSAVSTE IAQVVLSQIP 70 80 90 100 110 120 DIVIPLKELT GLNLPDVNIG DLRNLKIPPY LHIPSNVQLP GGIQIPNLQI PLKLPAPGDV 130 140 150 160 170 180 SDPAILPPAD QQPGAIVKEL SRDTPFSMVA LTSETLASAE SKVRALQADG TWGQWVSPDM 190 200 210 220 230 240 IDTRRTDKTA SDGKVATEPV YVGLTKAIQI LTPTSTPAAA GAPAAVPAPA PAPEAPAPAP 250 260 270 280 290 300 APAAGGAAPL GYTPAAVNTP LRQQPARAGA DDVTAVLIEP GSGPGDATLG DIASPLDSGG 310 320 330 340 350 360 PKVISRQQWG ADESIRCQDP DYDDFIGGAT VHHTAGANDY SKAESAEIVR AIYAYHAQTL 370 380 390 400 410 420 GWCDIGYNAL VDKYGQIFEG RAGGLDRPVQ GAHAGGFNEN TTGVAMMGDF SSEDPPQATL 430 440 450 460 470 480 DAVGKFLGWK LGKAGLDPLG ETTMYSEGTE FTPYAEGEAV DLPVIFAHRD VGNTSCPGDA 490 500 510 520 530 540 AYSHMDEIRQ IAAASLGGGN ASLASDAPAG EAPAPSGGPG TDASASLGAG IPALVNELLR 550 560 570 580 590 600 LTDPSPVAQK WVAEGGDTGR LGQALTGLLQ AKAGNSGAQF ANGAIFTSPN GGVWAVLGQI 610 620 630 640 650 660 FKTWQNLGAD NGELGLPTSD EYPIPGGLRT DFENGSLIFN EITGIVTKVL KTYNDTYAEA 670 680 690 700 710 YKNGAPVDAA APVAPPADPA QVPPAPVEPA PAPAPAPEPA PAPAPVEPAP VPAG

References

[1]

"The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse." McLeod M.P., Warren R.L., Hsiao W.W.L., Araki N., Myhre M., Fernandes C., Miyazawa D., Wong W., Lillquist A.L., Wang D., Dosanjh M., Hara H., Petrescu A., Morin R.D., Yang G., Stott J.M., Schein J.E., Shin H. , Smailus D., Siddiqui A.S., Marra M.A., Jones S.J.M., Holt R., Brinkman F.S.L., Miyauchi K., Fukuda M., Davies J.E., Mohn W.W., Eltis L.D. Proc. Natl. Acad. Sci. U.S.A. 103:15582-15587(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RHA1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000431 Genomic DNA. Translation: ABG95847.1.
RefSeq	YP_704005.1. NC_008268.1.
3D structure databases
ProteinModelPortal	Q0S9D9.
ModBase	Search...
Protein-protein interaction databases
STRING	101510.RHA1_ro04050.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG95847; ABG95847; RHA1_ro04050.
GeneID	4221601.
KEGG	rha:RHA1_ro04050.
PATRIC	23206967. VBIRhoJos26306_4078.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG5479.
HOGENOM	HOG000054380.
OMA	YALMDEI.
ProtClustDB	CLSK758046.
Enzyme and pathway databases
BioCyc	RJOS101510:GJJ1-4047-MONOMER.
Family and domain databases
Gene3D	3.40.80.10. 1 hit.
InterPro	IPR002502. Amidase_domain. IPR013207. LGFP. IPR015510. PGRP. IPR006619. PGRP_domain_met/bac. [Graphical view]
PANTHER	PTHR11022. PTHR11022. 1 hit.
Pfam	PF01510. Amidase_2. 1 hit. PF08310. LGFP. 1 hit. [Graphical view]
SMART	SM00701. PGRP. 1 hit. [Graphical view]
SUPFAM	SSF55846. Amidase_2. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0S9D9_RHOSR

Accession

Primary (citable) accession number: Q0S9D9

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)