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Protein
Submitted name:

Probable transcriptional regulator, TetR family protein

Gene

RHA1_ro04631

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi31 – 50H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-4625-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulator, TetR family proteinImported
Gene namesi
Ordered Locus Names:RHA1_ro04631Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000008710 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ0S7R9.

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro04631.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2GFNX-ray1.90A/B1-209[»]
ProteinModelPortaliQ0S7R9.
SMRiQ0S7R9.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0S7R9.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 68HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4108A52. Bacteria.
ENOG410ZMTE. LUCA.
HOGENOMiHOG000248228.
OMAiAMVHARY.
OrthoDBiPOG091H03K2.

Family and domain databases

InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
IPR011075. Tet_transcr_reg_TetR-rel_C.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0S7R9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKIVDHDER RRALADAVLA LIAREGISAV TTRAVAEESG WSTGVLNHYF
60 70 80 90 100
GSRHELLLAA LRRAGDIQGD RYRTILDEEG AGPIEKLRNI TASILPLDER
110 120 130 140 150
RLAMTRVFLF FYAEGAAEET ARGEIAAFLA RWRGVVRESV VAAQREGTVS
160 170 180 190 200
TDLDADAVTV ALVALTDGLA LQAILDPVVM KAISAEDAAA RCVDAAVRRT

TEEAGAVGR
Length:209
Mass (Da):22,510
Last modified:September 5, 2006 - v1
Checksum:i5EC8EAE25558D5D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG96417.1.

Genome annotation databases

EnsemblBacteriaiABG96417; ABG96417; RHA1_ro04631.
KEGGirha:RHA1_ro04631.

Similar proteinsi

Entry informationi

Entry nameiQ0S7R9_RHOJR
AccessioniPrimary (citable) accession number: Q0S7R9
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: September 27, 2017
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported