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Protein
Submitted name:

Probable transcriptional regulator, TetR family protein

Gene

RHA1_ro04631

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-4625-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulator, TetR family proteinImported
Gene namesi
Ordered Locus Names:RHA1_ro04631Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000008710 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ0S7R9.

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro04631.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2GFNX-ray1.90A/B2-209[»]
ProteinModelPortaliQ0S7R9.
SMRiQ0S7R9.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0S7R9.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 68HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4108A52. Bacteria.
ENOG410ZMTE. LUCA.
HOGENOMiHOG000248228.
OMAiESGWSTG.
OrthoDBiPOG091H03K2.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0S7R9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKIVDHDER RRALADAVLA LIAREGISAV TTRAVAEESG WSTGVLNHYF
60 70 80 90 100
GSRHELLLAA LRRAGDIQGD RYRTILDEEG AGPIEKLRNI TASILPLDER
110 120 130 140 150
RLAMTRVFLF FYAEGAAEET ARGEIAAFLA RWRGVVRESV VAAQREGTVS
160 170 180 190 200
TDLDADAVTV ALVALTDGLA LQAILDPVVM KAISAEDAAA RCVDAAVRRT

TEEAGAVGR
Length:209
Mass (Da):22,510
Last modified:September 5, 2006 - v1
Checksum:i5EC8EAE25558D5D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG96417.1.

Genome annotation databases

EnsemblBacteriaiABG96417; ABG96417; RHA1_ro04631.
KEGGirha:RHA1_ro04631.
PATRICi23208177. VBIRhoJos26306_4673.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG96417.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2GFNX-ray1.90A/B2-209[»]
ProteinModelPortaliQ0S7R9.
SMRiQ0S7R9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi101510.RHA1_ro04631.

Proteomic databases

PRIDEiQ0S7R9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG96417; ABG96417; RHA1_ro04631.
KEGGirha:RHA1_ro04631.
PATRICi23208177. VBIRhoJos26306_4673.

Phylogenomic databases

eggNOGiENOG4108A52. Bacteria.
ENOG410ZMTE. LUCA.
HOGENOMiHOG000248228.
OMAiESGWSTG.
OrthoDBiPOG091H03K2.

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-4625-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ0S7R9.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ0S7R9_RHOJR
AccessioniPrimary (citable) accession number: Q0S7R9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: November 30, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.