Q0S6F4 (Q0S6F4_RHOSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Probable transcriptional regulator, TetR family protein EMBL ABG96882.1

Gene names

Ordered Locus Names:

RHA1_ro05101 EMBL ABG96882.1

Organism

Rhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP] EMBL ABG96882.1

Taxonomic identifier

101510 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus › Rhodococcus jostii

Protein attributes

Sequence length	232 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH tetR-type DNA-binding domain. RuleBase RU000710 SAAS SAAS001647

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000710 SAAS SAAS001647
Ligand	DNA-binding RuleBase RU000710 SAAS SAAS001647
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0S6F4 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 96E6A0625A5A39CF	FASTA	232	26,063
	10 20 30 40 50 60 MTERVDTPGI DPADFRVHVV AQAIRLFSEN GYEATTVEQI ASAAGVSRRT FFRQFRSKED 70 80 90 100 110 120 VIFADHESLL QQAGDYLSTD SDDPWAAVCR TAGLVFDRFR ENRELSARRY QVVQRVPALR 130 140 150 160 170 180 DREIVTGFRY ERLFVDYLRG VVPTEPVLKV IGFAAAVTAC HNFLLRNMIK GDPDATAEEL 190 200 210 220 230 ERALLDVRRT FGVAPGASTQ EQDAVLVVSY PPGTPVDEIT GRIQAQLSRR RD

References

[1]

"The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse." McLeod M.P., Warren R.L., Hsiao W.W.L., Araki N., Myhre M., Fernandes C., Miyazawa D., Wong W., Lillquist A.L., Wang D., Dosanjh M., Hara H., Petrescu A., Morin R.D., Yang G., Stott J.M., Schein J.E., Shin H. , Smailus D., Siddiqui A.S., Marra M.A., Jones S.J.M., Holt R., Brinkman F.S.L., Miyauchi K., Fukuda M., Davies J.E., Mohn W.W., Eltis L.D. Proc. Natl. Acad. Sci. U.S.A. 103:15582-15587(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RHA1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000431 Genomic DNA. Translation: ABG96882.1.
RefSeq	YP_705040.1. NC_008268.1.
3D structure databases
ProteinModelPortal	Q0S6F4.
ModBase	Search...
Protein-protein interaction databases
STRING	101510.RHA1_ro05101.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG96882; ABG96882; RHA1_ro05101.
GeneID	4222652.
KEGG	rha:RHA1_ro05101.
PATRIC	23209147. VBIRhoJos26306_5153.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG116599.
HOGENOM	HOG000253516.
OMA	VARRTFF.
ProtClustDB	CLSK2298423.
Enzyme and pathway databases
BioCyc	RJOS101510:GJJ1-5098-MONOMER.
Family and domain databases
Gene3D	1.10.10.60. 1 hit. 1.10.357.10. 1 hit.
InterPro	IPR009057. Homeodomain-like. IPR001647. HTH_TetR. IPR015893. Tet_transcr_reg_TetR-like_C. [Graphical view]
Pfam	PF00440. TetR_N. 1 hit. [Graphical view]
PRINTS	PR00455. HTHTETR.
SUPFAM	SSF46689. Homeodomain_like. 1 hit.
PROSITE	PS50977. HTH_TETR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0S6F4_RHOSR

Accession

Primary (citable) accession number: Q0S6F4

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)