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Protein
Submitted name:

Probable transcriptional regulator, TetR family protein

Gene

RHA1_ro05101

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi36 – 55H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Enzyme and pathway databases

BioCyciRJOS101510:G1G71-5092-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulator, TetR family proteinImported
Gene namesi
Ordered Locus Names:RHA1_ro05101Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000008710 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro05101

Structurei

3D structure databases

ProteinModelPortaliQ0S6F4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 73HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4108Z78 Bacteria
ENOG4111XY0 LUCA
HOGENOMiHOG000253516
OMAiNHVLRRW
OrthoDBiPOG091H02BD

Family and domain databases

InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
PfamiView protein in Pfam
PF00440 TetR_N, 1 hit
PRINTSiPR00455 HTHTETR
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q0S6F4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTERVDTPGI DPADFRVHVV AQAIRLFSEN GYEATTVEQI ASAAGVSRRT
60 70 80 90 100
FFRQFRSKED VIFADHESLL QQAGDYLSTD SDDPWAAVCR TAGLVFDRFR
110 120 130 140 150
ENRELSARRY QVVQRVPALR DREIVTGFRY ERLFVDYLRG VVPTEPVLKV
160 170 180 190 200
IGFAAAVTAC HNFLLRNMIK GDPDATAEEL ERALLDVRRT FGVAPGASTQ
210 220 230
EQDAVLVVSY PPGTPVDEIT GRIQAQLSRR RD
Length:232
Mass (Da):26,063
Last modified:September 5, 2006 - v1
Checksum:i96E6A0625A5A39CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA Translation: ABG96882.1
RefSeqiWP_011597337.1, NC_008268.1

Genome annotation databases

EnsemblBacteriaiABG96882; ABG96882; RHA1_ro05101
GeneIDi4222652
KEGGirha:RHA1_ro05101
PATRICifig|101510.16.peg.5153

Similar proteinsi

Entry informationi

Entry nameiQ0S6F4_RHOJR
AccessioniPrimary (citable) accession number: Q0S6F4
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: May 23, 2018
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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