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Q0S6F4

- Q0S6F4_RHOSR

UniProt

Q0S6F4 - Q0S6F4_RHOSR

Protein
Submitted name:

Probable transcriptional regulator, TetR family protein

Gene

RHA1_ro05101

Organism
Rhodococcus sp. (strain RHA1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (05 Sep 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotationSAAS annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciRJOS101510:GJJ1-5098-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Probable transcriptional regulator, TetR family proteinImported
    Gene namesi
    Ordered Locus Names:RHA1_ro05101Imported
    OrganismiRhodococcus sp. (strain RHA1)Imported
    Taxonomic identifieri101510 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
    ProteomesiUP000008710: Chromosome

    PTM / Processingi

    Proteomic databases

    PRIDEiQ0S6F4.

    Interactioni

    Protein-protein interaction databases

    STRINGi101510.RHA1_ro05101.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0S6F4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation
    Contains HTH tetR-type DNA-binding domain.SAAS annotation

    Phylogenomic databases

    eggNOGiNOG116599.
    HOGENOMiHOG000253516.
    OMAiLLGHFDE.
    OrthoDBiEOG6HB9PG.

    Family and domain databases

    Gene3Di1.10.10.60. 1 hit.
    1.10.357.10. 1 hit.
    InterProiIPR009057. Homeodomain-like.
    IPR001647. HTH_TetR.
    IPR015893. Tet_transcr_reg_TetR-like_C.
    [Graphical view]
    PfamiPF00440. TetR_N. 1 hit.
    [Graphical view]
    PRINTSiPR00455. HTHTETR.
    SUPFAMiSSF46689. SSF46689. 1 hit.
    PROSITEiPS50977. HTH_TETR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0S6F4-1 [UniParc]FASTAAdd to Basket

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    MTERVDTPGI DPADFRVHVV AQAIRLFSEN GYEATTVEQI ASAAGVSRRT    50
    FFRQFRSKED VIFADHESLL QQAGDYLSTD SDDPWAAVCR TAGLVFDRFR 100
    ENRELSARRY QVVQRVPALR DREIVTGFRY ERLFVDYLRG VVPTEPVLKV 150
    IGFAAAVTAC HNFLLRNMIK GDPDATAEEL ERALLDVRRT FGVAPGASTQ 200
    EQDAVLVVSY PPGTPVDEIT GRIQAQLSRR RD 232
    Length:232
    Mass (Da):26,063
    Last modified:September 5, 2006 - v1
    Checksum:i96E6A0625A5A39CF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000431 Genomic DNA. Translation: ABG96882.1.
    RefSeqiYP_705040.1. NC_008268.1.

    Genome annotation databases

    EnsemblBacteriaiABG96882; ABG96882; RHA1_ro05101.
    GeneIDi4222652.
    KEGGirha:RHA1_ro05101.
    PATRICi23209147. VBIRhoJos26306_5153.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000431 Genomic DNA. Translation: ABG96882.1 .
    RefSeqi YP_705040.1. NC_008268.1.

    3D structure databases

    ProteinModelPortali Q0S6F4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 101510.RHA1_ro05101.

    Proteomic databases

    PRIDEi Q0S6F4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG96882 ; ABG96882 ; RHA1_ro05101 .
    GeneIDi 4222652.
    KEGGi rha:RHA1_ro05101.
    PATRICi 23209147. VBIRhoJos26306_5153.

    Phylogenomic databases

    eggNOGi NOG116599.
    HOGENOMi HOG000253516.
    OMAi LLGHFDE.
    OrthoDBi EOG6HB9PG.

    Enzyme and pathway databases

    BioCyci RJOS101510:GJJ1-5098-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.60. 1 hit.
    1.10.357.10. 1 hit.
    InterProi IPR009057. Homeodomain-like.
    IPR001647. HTH_TetR.
    IPR015893. Tet_transcr_reg_TetR-like_C.
    [Graphical view ]
    Pfami PF00440. TetR_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00455. HTHTETR.
    SUPFAMi SSF46689. SSF46689. 1 hit.
    PROSITEi PS50977. HTH_TETR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RHA1Imported.

    Entry informationi

    Entry nameiQ0S6F4_RHOSR
    AccessioniPrimary (citable) accession number: Q0S6F4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2006
    Last sequence update: September 5, 2006
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3