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Q0S6F4

- Q0S6F4_RHOSR

UniProt

Q0S6F4 - Q0S6F4_RHOSR

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Protein
Submitted name:

Probable transcriptional regulator, TetR family protein

Gene

RHA1_ro05101

Organism
Rhodococcus sp. (strain RHA1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-5098-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulator, TetR family proteinImported
Gene namesi
Ordered Locus Names:RHA1_ro05101Imported
OrganismiRhodococcus sp. (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
ProteomesiUP000008710: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ0S6F4.

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro05101.

Structurei

3D structure databases

ProteinModelPortaliQ0S6F4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation
Contains HTH tetR-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiNOG116599.
HOGENOMiHOG000253516.
OMAiLLGHFDE.
OrthoDBiEOG6HB9PG.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0S6F4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTERVDTPGI DPADFRVHVV AQAIRLFSEN GYEATTVEQI ASAAGVSRRT
60 70 80 90 100
FFRQFRSKED VIFADHESLL QQAGDYLSTD SDDPWAAVCR TAGLVFDRFR
110 120 130 140 150
ENRELSARRY QVVQRVPALR DREIVTGFRY ERLFVDYLRG VVPTEPVLKV
160 170 180 190 200
IGFAAAVTAC HNFLLRNMIK GDPDATAEEL ERALLDVRRT FGVAPGASTQ
210 220 230
EQDAVLVVSY PPGTPVDEIT GRIQAQLSRR RD
Length:232
Mass (Da):26,063
Last modified:September 5, 2006 - v1
Checksum:i96E6A0625A5A39CF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000431 Genomic DNA. Translation: ABG96882.1.
RefSeqiYP_705040.1. NC_008268.1.

Genome annotation databases

EnsemblBacteriaiABG96882; ABG96882; RHA1_ro05101.
GeneIDi4222652.
KEGGirha:RHA1_ro05101.
PATRICi23209147. VBIRhoJos26306_5153.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000431 Genomic DNA. Translation: ABG96882.1 .
RefSeqi YP_705040.1. NC_008268.1.

3D structure databases

ProteinModelPortali Q0S6F4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 101510.RHA1_ro05101.

Proteomic databases

PRIDEi Q0S6F4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG96882 ; ABG96882 ; RHA1_ro05101 .
GeneIDi 4222652.
KEGGi rha:RHA1_ro05101.
PATRICi 23209147. VBIRhoJos26306_5153.

Phylogenomic databases

eggNOGi NOG116599.
HOGENOMi HOG000253516.
OMAi LLGHFDE.
OrthoDBi EOG6HB9PG.

Enzyme and pathway databases

BioCyci RJOS101510:GJJ1-5098-MONOMER.

Family and domain databases

Gene3Di 1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProi IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
[Graphical view ]
Pfami PF00440. TetR_N. 1 hit.
[Graphical view ]
PRINTSi PR00455. HTHTETR.
SUPFAMi SSF46689. SSF46689. 1 hit.
PROSITEi PS50977. HTH_TETR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RHA1Imported.

Entry informationi

Entry nameiQ0S6F4_RHOSR
AccessioniPrimary (citable) accession number: Q0S6F4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: October 1, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3