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Protein
Submitted name:

Possible DNA ligase (ATP), N-terminal

Gene

RHA1_ro05108

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
  2. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-5105-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Possible DNA ligase (ATP), N-terminalImported
Gene namesi
Ordered Locus Names:RHA1_ro05108Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
ProteomesiUP000008710 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ0S6E7.

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro05108.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0S6E7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASPAEELDV DGVAVRLSNP DKIYYPKLGA EGGTKRHLVE YYRTVALDGA
60 70 80 90 100
LLTALFDRPT HLQRFPDGIE GEEIYQKRVP AKRPDHVESC EVTFPSGRKA
110 120 130 140 150
DVLRVRSAAN IVWAANLGNI TFHPWAVRCP DVDHPDELRI DLDPQPGTGF
160 170 180 190 200
DDARAVALDV LRPLLDELGL VGYPKTSGGR GLHVYLRIEP RWDFIEVRRA
210 220 230 240 250
GIALAREIER RSGDRATTSW WKEERGERIF LDFNQNARDK TIASAYSARK
260 270 280 290 300
TPIATVSTPV TWEELVDVDP DDFTIATVPA LLAKRGDPMG TMGDVAQSLD
310 320 330 340
VLLEMAERDA ANGLGDLPYP PNYPKMPGEP KRVQPSRDRD RK
Length:342
Mass (Da):38,172
Last modified:September 5, 2006 - v1
Checksum:iE9919E606528E901
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG96889.1.
RefSeqiYP_705047.1. NC_008268.1.

Genome annotation databases

EnsemblBacteriaiABG96889; ABG96889; RHA1_ro05108.
KEGGirha:RHA1_ro05108.
PATRICi23209161. VBIRhoJos26306_5160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG96889.1.
RefSeqiYP_705047.1. NC_008268.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi101510.RHA1_ro05108.

Proteomic databases

PRIDEiQ0S6E7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG96889; ABG96889; RHA1_ro05108.
KEGGirha:RHA1_ro05108.
PATRICi23209161. VBIRhoJos26306_5160.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-5105-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RHA1Imported.

Entry informationi

Entry nameiQ0S6E7_RHOJR
AccessioniPrimary (citable) accession number: Q0S6E7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: April 1, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.