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Protein
Submitted name:

Transcriptional regulator

Gene

RHA1_ro05125

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi134MagnesiumCombined sources1
Metal bindingi137MagnesiumCombined sources1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation
LigandMagnesiumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatorImported
Gene namesi
Ordered Locus Names:RHA1_ro05125Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000008710 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro05125

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3FM5X-ray2.00A/B/C/D1-146[»]
5CYVX-ray1.52A/B1-146[»]
ProteinModelPortaliQ0S6D0
SMRiQ0S6D0
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0S6D0

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 141HTH marR-typeInterPro annotationAdd BLAST134

Phylogenomic databases

eggNOGiENOG41061AN Bacteria
COG1846 LUCA
HOGENOMiHOG000221454
OMAiVGYNARR
OrthoDBiPOG091H06HC

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000835 HTH_MarR-typ
IPR023187 Tscrpt_reg_MarR-type_CS
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF01047 MarR, 1 hit
PRINTSiPR00598 HTHMARR
SMARTiView protein in SMART
SM00347 HTH_MARR, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS01117 HTH_MARR_1, 1 hit
PS50995 HTH_MARR_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q0S6D0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAESQALSDD IGFLLSRVGG MVLGAVNKAL VPTGLRVRSY SVLVLACEQA
60 70 80 90 100
EGVNQRGVAA TMGLDPSQIV GLVDELEERG LVVRTLDPSD RRNKLIAATE
110 120 130 140
EGRRLRDDAK ARVDAAHGRY FEGIPDTVVN QMRDTLQSIA FPTFVE
Length:146
Mass (Da):15,811
Last modified:September 5, 2006 - v1
Checksum:i7B0280324669EF20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA Translation: ABG96906.1
RefSeqiWP_009478157.1, NC_008268.1

Genome annotation databases

EnsemblBacteriaiABG96906; ABG96906; RHA1_ro05125
GeneIDi4222676
KEGGirha:RHA1_ro05125
PATRICifig|101510.16.peg.5177

Similar proteinsi

Entry informationi

Entry nameiQ0S6D0_RHOJR
AccessioniPrimary (citable) accession number: Q0S6D0
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: May 23, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

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