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Q0S5R4

- DCD_RHOJR

UniProt

Q0S5R4 - DCD_RHOJR

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Protein

Deoxycytidine triphosphate deaminase

Gene

dcd

Organism
Rhodococcus jostii (strain RHA1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

dCTP + H2O = dUTP + NH3.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. dCTP deaminase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. dUMP biosynthetic process Source: UniProtKB-UniPathway
  2. dUTP biosynthetic process Source: InterPro
  3. pyrimidine ribonucleotide biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Nucleotide metabolism

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-5339-MONOMER.
UniPathwayiUPA00610; UER00665.

Names & Taxonomyi

Protein namesi
Recommended name:
Deoxycytidine triphosphate deaminaseUniRule annotation (EC:3.5.4.13UniRule annotation)
Short name:
dCTP deaminaseUniRule annotation
Gene namesi
Name:dcdUniRule annotation
Ordered Locus Names:RHA1_ro05342
OrganismiRhodococcus jostii (strain RHA1)
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
ProteomesiUP000008710: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 189189Deoxycytidine triphosphate deaminasePRO_1000009798Add
BLAST

Proteomic databases

PRIDEiQ0S5R4.

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro05342.

Structurei

3D structure databases

ProteinModelPortaliQ0S5R4.
SMRiQ0S5R4. Positions 1-189.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the dCTP deaminase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0717.
HOGENOMiHOG000228601.
KOiK01494.
OMAiRPGMMIG.
OrthoDBiEOG67DPKR.

Family and domain databases

Gene3Di2.70.40.10. 1 hit.
HAMAPiMF_00146. dCTP_deaminase.
InterProiIPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view]
PfamiPF00692. dUTPase. 1 hit.
[Graphical view]
SUPFAMiSSF51283. SSF51283. 1 hit.
TIGRFAMsiTIGR02274. dCTP_deam. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0S5R4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLLSDRDLRA EISAGRLGID PFDDSMVQPS SVDVRLDSLF RVFNNTRYTH
60 70 80 90 100
IDPAQRQDEL TTLVEPAEGE PFVLHPGEFV LGSTLEVCSL PDDLAGRLEG
110 120 130 140 150
KSSLGRLGLL THSTAGFIDP GFNGHITLEL SNVANLPITL WPGMKIGQLC
160 170 180
LLRLSSAAEH PYGSSAVGSK YQGQRGPTPS KAYLNFAQS
Length:189
Mass (Da):20,451
Last modified:September 5, 2006 - v1
Checksum:i0FAFF7FADB04378C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG97122.1.
RefSeqiYP_705280.1. NC_008268.1.

Genome annotation databases

EnsemblBacteriaiABG97122; ABG97122; RHA1_ro05342.
GeneIDi4222893.
KEGGirha:RHA1_ro05342.
PATRICi23209621. VBIRhoJos26306_5389.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG97122.1 .
RefSeqi YP_705280.1. NC_008268.1.

3D structure databases

ProteinModelPortali Q0S5R4.
SMRi Q0S5R4. Positions 1-189.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 101510.RHA1_ro05342.

Proteomic databases

PRIDEi Q0S5R4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG97122 ; ABG97122 ; RHA1_ro05342 .
GeneIDi 4222893.
KEGGi rha:RHA1_ro05342.
PATRICi 23209621. VBIRhoJos26306_5389.

Phylogenomic databases

eggNOGi COG0717.
HOGENOMi HOG000228601.
KOi K01494.
OMAi RPGMMIG.
OrthoDBi EOG67DPKR.

Enzyme and pathway databases

UniPathwayi UPA00610 ; UER00665 .
BioCyci RJOS101510:GJJ1-5339-MONOMER.

Family and domain databases

Gene3Di 2.70.40.10. 1 hit.
HAMAPi MF_00146. dCTP_deaminase.
InterProi IPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view ]
Pfami PF00692. dUTPase. 1 hit.
[Graphical view ]
SUPFAMi SSF51283. SSF51283. 1 hit.
TIGRFAMsi TIGR02274. dCTP_deam. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RHA1.

Entry informationi

Entry nameiDCD_RHOJR
AccessioniPrimary (citable) accession number: Q0S5R4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: September 5, 2006
Last modified: November 26, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3