Q0S2E1 (Q0S2E1_RHOSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease III EMBL ABG98295.1
EC=3.1.26.3 EMBL ABG98295.1

Gene names

Ordered Locus Names:

RHA1_ro06522

Organism

Rhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP] EMBL ABG98295.1

Taxonomic identifier

101510 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	252 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABG98295.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro rRNA catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	double-stranded RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease III activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0S2E1 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 8FE1CC263B60067C	FASTA	252	26,322
	10 20 30 40 50 60 MTSDISNTPA GGEEDHASLL AALGVEIEPS LLTLALTHRS YAYENGGLPT NERLEFLGDS 70 80 90 100 110 120 VLGVTVTEKL YLAHPDKSEG DLAKIRASIV NMHALAEVAR TLGEGGLGAH LLLGKGEEMT 130 140 150 160 170 180 GGRDKPSILA DGMESILGAI HLEHGIDTAR RVVLDLFSDL LQRAPRLGAG LDWKTSLQEL 190 200 210 220 230 240 TAERGVGVPA YEITATGPDH DKEFTATVIV GGKPLGVGIG RSKKEAEQKA ASTAWNALSD 250 AGPDVAADDV SA

References

[1]

"The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse." McLeod M.P., Warren R.L., Hsiao W.W.L., Araki N., Myhre M., Fernandes C., Miyazawa D., Wong W., Lillquist A.L., Wang D., Dosanjh M., Hara H., Petrescu A., Morin R.D., Yang G., Stott J.M., Schein J.E., Shin H. , Smailus D., Siddiqui A.S., Marra M.A., Jones S.J.M., Holt R., Brinkman F.S.L., Miyauchi K., Fukuda M., Davies J.E., Mohn W.W., Eltis L.D. Proc. Natl. Acad. Sci. U.S.A. 103:15582-15587(2006) [PubMed: 17030794] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000431 Genomic DNA. Translation: ABG98295.1.
RefSeq	YP_706453.1. NC_008268.1.
3D structure databases
ProteinModelPortal	Q0S2E1.
SMR	Q0S2E1. Positions 19-165.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0S2E1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4224073.
GenomeReviews	Gene locus RHA1_ro06522 in contig CP000431_GR.
KEGG	rha:RHA1_ro06522.
PATRIC	23212009. VBIRhoJos26306_6576.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0571.
HOGENOM	HBG744556.
OMA	ALTHKSF.
ProtClustDB	PRK00102.
Enzyme and pathway databases
BioCyc	RSP101510:RHA1_RO06522-MONOMER.
Family and domain databases
HAMAP	MF_00104. RNase_III. [Tree]
InterPro	IPR001159. Ds-RNA-bd. IPR014720. dsRNA-bd-like. IPR000999. RNase_III. IPR011907. RNase_III_bac. [Graphical view]
Gene3D	G3DSA:3.30.160.20. dsRNA-bd-like. 1 hit. G3DSA:1.10.1520.10. RNase_III. 1 hit.
KO	K03685.
PANTHER	PTHR11207. PTHR11207. 1 hit.
Pfam	PF00035. dsrm. 1 hit. PF00636. Ribonuclease_3. 1 hit. [Graphical view]
SMART	SM00358. DSRM. 1 hit. SM00535. RIBOc. 1 hit. [Graphical view]
SUPFAM	SSF69065. RNase_III. 1 hit.
TIGRFAMs	TIGR02191. RNaseIII. 1 hit.
PROSITE	PS50137. DS_RBD. 1 hit. PS00517. RNASE_3_1. 1 hit. PS50142. RNASE_3_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0S2E1_RHOSR

Accession

Primary (citable) accession number: Q0S2E1

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)