Q0S193 (Q0S193_RHOSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ABG98693.1

Gene names

Ordered Locus Names:

RHA1_ro06927

Organism

Rhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP] EMBL ABG98693.1

Taxonomic identifier

101510 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	530 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS016032
Ligand	DNA-binding SAAS SAAS000792
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro two-component response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0S193 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 79AE8149572E4FEB	FASTA	530	57,213
	10 20 30 40 50 60 MHPHGTLPGS GKGLSRAELL AAVSLAIDLG LGQPMEHMLR SSLIATRIAE RMGLDPEQQA 70 80 90 100 110 120 TVYYANLVGW IGCHADSHEL SALFGDDIAF RADTYAVDMT GLPFLRLMTS HVGRGLPGWE 130 140 150 160 170 180 RGIRAAVFLV AARGRVATLI HSHCSSAGVL SDRMGLDGQV GKALAYVFER WDGRGLPNGC 190 200 210 220 230 240 RGEGIPIEIH ISHVADVVEV HLRTGGLGHA KEVLRSRRGS QFSPAVVEVF ERDAAAIVDG 250 260 270 280 290 300 LLEMDVWVAA LARAPDRDRT LTAEESDELL GAMADFVDLK SPFTLGHSRG VANLVAGAAR 310 320 330 340 350 360 HLGMSPSDIT HLYRAGLVHS LGKMGVSNQI WEKKGPLTTT EWERVRMYPD LTGRILSRVN 370 380 390 400 410 420 GLESVVSVAM KHRERIDGSG FPRGIAGAEL TAKDRLLAAA DAYQRLLEPR PHRLALDPRG 430 440 450 460 470 480 AADRLKEEAR TGRLDAESVA AVLAAAGQRV SRRTPWPAGL TDREVEILRL VAQGRSNREI 490 500 510 520 530 AADLFIAEKT ARNHVERVYA KLGVNNRTQA SLAAIDRGLV GFPVNAVVGK

References

[1]

"The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse." McLeod M.P., Warren R.L., Hsiao W.W.L., Araki N., Myhre M., Fernandes C., Miyazawa D., Wong W., Lillquist A.L., Wang D., Dosanjh M., Hara H., Petrescu A., Morin R.D., Yang G., Stott J.M., Schein J.E., Shin H. , Smailus D., Siddiqui A.S., Marra M.A., Jones S.J.M., Holt R., Brinkman F.S.L., Miyauchi K., Fukuda M., Davies J.E., Mohn W.W., Eltis L.D. Proc. Natl. Acad. Sci. U.S.A. 103:15582-15587(2006) [PubMed: 17030794] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000431 Genomic DNA. Translation: ABG98693.1.
RefSeq	YP_706851.1. NC_008268.1.
3D structure databases
ProteinModelPortal	Q0S193.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0S193.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4224478.
GenomeReviews	Gene locus RHA1_ro06927 in contig CP000431_GR.
KEGG	rha:RHA1_ro06927.
PATRIC	23212849. VBIRhoJos26306_6989.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2206.
HOGENOM	HBG568197.
OMA	DLGCSSN.
ProtClustDB	CLSK688397.
Enzyme and pathway databases
BioCyc	RSP101510:RHA1_RO06927-MONOMER.
Family and domain databases
InterPro	IPR023279. HD. IPR003607. Metal-dep_PHydrolase_HD_dom. IPR006674. Metal-dep_PHydrolase_HD_sub. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR011990. TPR-like_helical. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.3210.10. HD. 1 hit. G3DSA:1.25.40.10. TPR-like_helical. 1 hit. G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF00196. GerE. 1 hit. PF01966. HD. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
SMART	SM00471. HDc. 1 hit. SM00421. HTH_LUXR. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit.
PROSITE	PS50043. HTH_LUXR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0S193_RHOSR

Accession

Primary (citable) accession number: Q0S193

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)