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Protein
Submitted name:

Uncharacterized protein

Gene

RHA1_ro06927

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi477 – 496H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-6921-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:RHA1_ro06927Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000008710 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ0S193.

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro06927.

Structurei

3D structure databases

ProteinModelPortaliQ0S193.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini452 – 518HTH luxR-typeInterPro annotationAdd BLAST67

Phylogenomic databases

eggNOGiENOG4105DHT. Bacteria.
COG2206. LUCA.
COG2771. LUCA.
HOGENOMiHOG000268981.
OMAiTRCQRGA.
OrthoDBiPOG091H09F9.

Family and domain databases

CDDicd00077. HDc. 1 hit.
cd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR003607. HD/PDEase_dom.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiView protein in PROSITE
PS50043. HTH_LUXR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0S193-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHPHGTLPGS GKGLSRAELL AAVSLAIDLG LGQPMEHMLR SSLIATRIAE
60 70 80 90 100
RMGLDPEQQA TVYYANLVGW IGCHADSHEL SALFGDDIAF RADTYAVDMT
110 120 130 140 150
GLPFLRLMTS HVGRGLPGWE RGIRAAVFLV AARGRVATLI HSHCSSAGVL
160 170 180 190 200
SDRMGLDGQV GKALAYVFER WDGRGLPNGC RGEGIPIEIH ISHVADVVEV
210 220 230 240 250
HLRTGGLGHA KEVLRSRRGS QFSPAVVEVF ERDAAAIVDG LLEMDVWVAA
260 270 280 290 300
LARAPDRDRT LTAEESDELL GAMADFVDLK SPFTLGHSRG VANLVAGAAR
310 320 330 340 350
HLGMSPSDIT HLYRAGLVHS LGKMGVSNQI WEKKGPLTTT EWERVRMYPD
360 370 380 390 400
LTGRILSRVN GLESVVSVAM KHRERIDGSG FPRGIAGAEL TAKDRLLAAA
410 420 430 440 450
DAYQRLLEPR PHRLALDPRG AADRLKEEAR TGRLDAESVA AVLAAAGQRV
460 470 480 490 500
SRRTPWPAGL TDREVEILRL VAQGRSNREI AADLFIAEKT ARNHVERVYA
510 520 530
KLGVNNRTQA SLAAIDRGLV GFPVNAVVGK
Length:530
Mass (Da):57,213
Last modified:September 5, 2006 - v1
Checksum:i79AE8149572E4FEB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000431 Genomic DNA. Translation: ABG98693.1.
RefSeqiWP_011598664.1. NC_008268.1.

Genome annotation databases

EnsemblBacteriaiABG98693; ABG98693; RHA1_ro06927.
GeneIDi4224478.
KEGGirha:RHA1_ro06927.
PATRICifig|101510.16.peg.6989.

Similar proteinsi

Entry informationi

Entry nameiQ0S193_RHOJR
AccessioniPrimary (citable) accession number: Q0S193
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: September 27, 2017
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported