Q0RY06 (Q0RY06_RHOSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Name:	gdhA3 EMBL ABG99830.1
Ordered Locus Names:	RHA1_ro08786

Encoded on

Plasmid pRHL1 EMBL ABG99830.1

Organism

Rhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP]

Taxonomic identifier

101510 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	423 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004418 PIRNR PIRNR000185 EMBL ABG99830.1
Technical term	Complete proteome Plasmid EMBL ABG99830.1
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	113	1	By similarity PIRSR PIRSR000185-1

Sequences

	Sequence		Length	Mass (Da)
	Q0RY06 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 412209DA78CB2934	FASTA	423	44,693
	10 20 30 40 50 60 MTTTTDVISI DAGPLDDALA QLTGAVEKLG YGPGMHQLLA KPRREMSVSI PLRRDNGDVE 70 80 90 100 110 120 VLSGYRVQHN FSRGPAKGGL RFSPHVSLDE VRALAMWMTW KCALLDVPYG GAKGGITIDP 130 140 150 160 170 180 TQYSMGELSR VTRRYTSEIL PIIGPEKDIP APDIGTDEQT MAWMMDTFSA NVGYTVPSVV 190 200 210 220 230 240 TGKPVSLGGS LGRSSATSKG VVHVALAALE YRGLTPSFAT AAVQGFGKVG AGSAQFLAEA 250 260 270 280 290 300 GVKVVAVGDQ YGSIHNGNGL DIPALQAHVA ATGTVRGFAD SEPIDAAALL ELEVDLLVPA 310 320 330 340 350 360 AVEGVINSDN ASNIRASIVV EGANGPTTAA ADKILAARNV LVVPDILANA GGVIVSYFEW 370 380 390 400 410 420 VQGNQAYWWT ANEVDERLET RMIQGWRCVL ETSIRRGLSL REAATVTAVE RVADAHLTRG LYP

References

[1]

"The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse." McLeod M.P., Warren R.L., Hsiao W.W.L., Araki N., Myhre M., Fernandes C., Miyazawa D., Wong W., Lillquist A.L., Wang D., Dosanjh M., Hara H., Petrescu A., Morin R.D., Yang G., Stott J.M., Schein J.E., Shin H. , Smailus D., Siddiqui A.S., Marra M.A., Jones S.J.M., Holt R., Brinkman F.S.L., Miyauchi K., Fukuda M., Davies J.E., Mohn W.W., Eltis L.D. Proc. Natl. Acad. Sci. U.S.A. 103:15582-15587(2006) [PubMed: 17030794] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000432 Genomic DNA. Translation: ABG99830.1.
RefSeq	YP_707988.1. NC_008269.1.
3D structure databases
ProteinModelPortal	Q0RY06.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0RY06.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4225691.
GenomeReviews	Gene locus RHA1_ro08786 in contig CP000432_GR.
KEGG	rha:RHA1_ro08786.
PATRIC	23215108. VBIRhoJos26306_8117.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0334.
HOGENOM	HBG590661.
OMA	EGFRVQH.
ProtClustDB	CLSK2779676.
Enzyme and pathway databases
BioCyc	RSP101510:RHA1_RO08786-MONOMER.
Family and domain databases
InterPro	IPR006095. Glu/Leu/Phe/Val_DH. IPR006096. Glu/Leu/Phe/Val_DH_C. IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom. IPR014362. Glu_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00261.
Pfam	PF00208. ELFV_dehydrog. 1 hit. PF02812. ELFV_dehydrog_N. 1 hit. [Graphical view]
PIRSF	PIRSF000185. Glu_DH. 1 hit.
PRINTS	PR00082. GLFDHDRGNASE.
SMART	SM00839. ELFV_dehydrog. 1 hit. [Graphical view]
PROSITE	PS00074. GLFV_DEHYDROGENASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0RY06_RHOSR

Accession

Primary (citable) accession number: Q0RY06

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)