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Protein
Submitted name:

Transcriptional regulator, TetR family protein

Gene

RHA1_ro09068

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi31 – 50H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-8342-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, TetR family proteinImported
Gene namesi
Ordered Locus Names:RHA1_ro09068Imported
Encoded oniPlasmid pRHL1Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000008710 Componenti: Plasmid pRHL1

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi66 ↔ 105Combined sources

Proteomic databases

PRIDEiQ0RX74.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2I10X-ray2.05A/B1-198[»]
ProteinModelPortaliQ0RX74.
SMRiQ0RX74.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0RX74.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 68HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

HOGENOMiHOG000161265.
OMAiHARGYDA.
OrthoDBiPOG091H08ZA.

Family and domain databases

InterProiView protein in InterPro
IPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
IPR011075. Tet_transcr_reg_TetR-rel_C.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0RX74-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGGRRRGFD DQVALQTAME LFWRQGYEGT SITDLTKALG INPPSLYAAF
60 70 80 90 100
GSKRDLFEKT LDRYMCERTL QLEEAMVRPT AHEAVLDFLT GRVEVFTAPG
110 120 130 140 150
QPFGCMTVQA GLASGEPHHE IVDLLTAARE QMRQTVLDRF EKALADGDLP
160 170 180 190
AGTDCTALAR YVMAAVYGLS VEAASGAPRE ELTAAAILAA QVVPRAQM
Length:198
Mass (Da):21,524
Last modified:September 5, 2006 - v1
Checksum:i4A3BF41C1D624BF1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000432 Genomic DNA. Translation: ABH00112.1.
RefSeqiWP_011599788.1. NC_008269.1.

Genome annotation databases

EnsemblBacteriaiABH00112; ABH00112; RHA1_ro09068.
GeneIDi4225973.
KEGGirha:RHA1_ro09068.
PATRICifig|101510.16.peg.8348.

Entry informationi

Entry nameiQ0RX74_RHOJR
AccessioniPrimary (citable) accession number: Q0RX74
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: September 27, 2017
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, PlasmidImported, Reference proteomeImported