Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Transcriptional regulator, TetR family protein

Gene

RHA1_ro09068

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-8342-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, TetR family proteinImported
Gene namesi
Ordered Locus Names:RHA1_ro09068Imported
Encoded oniPlasmid pRHL1Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000008710 Componenti: Plasmid pRHL1

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi66 ↔ 105Combined sources

Proteomic databases

PRIDEiQ0RX74.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2I10X-ray2.05A/B1-198[»]
ProteinModelPortaliQ0RX74.
SMRiQ0RX74.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0RX74.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 68HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000161265.
OMAiATRLFWI.
OrthoDBiPOG091H08ZA.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0RX74-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGGRRRGFD DQVALQTAME LFWRQGYEGT SITDLTKALG INPPSLYAAF
60 70 80 90 100
GSKRDLFEKT LDRYMCERTL QLEEAMVRPT AHEAVLDFLT GRVEVFTAPG
110 120 130 140 150
QPFGCMTVQA GLASGEPHHE IVDLLTAARE QMRQTVLDRF EKALADGDLP
160 170 180 190
AGTDCTALAR YVMAAVYGLS VEAASGAPRE ELTAAAILAA QVVPRAQM
Length:198
Mass (Da):21,524
Last modified:September 5, 2006 - v1
Checksum:i4A3BF41C1D624BF1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000432 Genomic DNA. Translation: ABH00112.1.
RefSeqiWP_011599788.1. NC_008269.1.

Genome annotation databases

EnsemblBacteriaiABH00112; ABH00112; RHA1_ro09068.
GeneIDi4225973.
KEGGirha:RHA1_ro09068.
PATRICi23215568. VBIRhoJos26306_8348.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000432 Genomic DNA. Translation: ABH00112.1.
RefSeqiWP_011599788.1. NC_008269.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2I10X-ray2.05A/B1-198[»]
ProteinModelPortaliQ0RX74.
SMRiQ0RX74.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ0RX74.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABH00112; ABH00112; RHA1_ro09068.
GeneIDi4225973.
KEGGirha:RHA1_ro09068.
PATRICi23215568. VBIRhoJos26306_8348.

Phylogenomic databases

HOGENOMiHOG000161265.
OMAiATRLFWI.
OrthoDBiPOG091H08ZA.

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-8342-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ0RX74.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ0RX74_RHOJR
AccessioniPrimary (citable) accession number: Q0RX74
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: November 30, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, PlasmidImported, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.