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Q0RV92

- Q0RV92_RHOSR

UniProt

Q0RV92 - Q0RV92_RHOSR

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

RHA1_ro11147

Organism
Rhodococcus sp. (strain RHA1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (05 Sep 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRJOS101510:GJJ1-9034-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:RHA1_ro11147Imported
    Encoded oniPlasmid pRHL3Imported
    OrganismiRhodococcus sp. (strain RHA1)Imported
    Taxonomic identifieri101510 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
    ProteomesiUP000008710: Plasmid pRHL3

    PTM / Processingi

    Proteomic databases

    PRIDEiQ0RV92.

    Interactioni

    Protein-protein interaction databases

    STRINGi101510.RHA1_ro11147.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0RV92.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiGVRIITR.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0RV92-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRLIAPMLAT AGTLPDNTDR PWSFEMKYDG CRMLASVGGG HEPVLWTRAM    50
    NVVTPSYPEI AEALTAAFGG RGRIVLDGEV VVLDQGKPSF GLLQRRLGVA 100
    HATKPLQRRI PVTFLPFDVL ALDGDDLTKA SYLERRAELA ELDSTIQDVG 150
    GLPITVPPHW DNQSSKIMLN AAKSAGMEGV LAKRSTSLYL PGQRSRSWIK 200
    HAIRTRSSVL VIGFVGSSRS VAALILGAYD AEGRLVQVGS VSSGLTVSMR 250
    RQLREDFRPL ERPSSPLTDP SAAAETFPGV QWLNPRLVVD VAYRAHTAGG 300
    LRHPSLKGRR FDVDFQSVRV EDL 323
    Length:323
    Mass (Da):35,206
    Last modified:September 5, 2006 - v1
    Checksum:iEEE6428CCDB329A2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000434 Genomic DNA. Translation: ABH00794.1.
    RefSeqiYP_708952.1. NC_008271.1.

    Genome annotation databases

    EnsemblBacteriaiABH00794; ABH00794; RHA1_ro11147.
    GeneIDi4226588.
    KEGGirha:RHA1_ro11147.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000434 Genomic DNA. Translation: ABH00794.1 .
    RefSeqi YP_708952.1. NC_008271.1.

    3D structure databases

    ProteinModelPortali Q0RV92.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 101510.RHA1_ro11147.

    Proteomic databases

    PRIDEi Q0RV92.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABH00794 ; ABH00794 ; RHA1_ro11147 .
    GeneIDi 4226588.
    KEGGi rha:RHA1_ro11147.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi GVRIITR.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci RJOS101510:GJJ1-9034-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RHA1Imported.

    Entry informationi

    Entry nameiQ0RV92_RHOSR
    AccessioniPrimary (citable) accession number: Q0RV92
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2006
    Last sequence update: September 5, 2006
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, PlasmidImported, Reference proteomeImported

    External Data

    Dasty 3