Q0RV92 (Q0RV92_RHOSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL ABH00794.1
EC=6.5.1.1 EMBL ABH00794.1

Gene names

Ordered Locus Names:

RHA1_ro11147 EMBL ABH00794.1

Encoded on

Plasmid pRHL3 EMBL ABH00794.1

Organism

Rhodococcus sp. (strain RHA1) [Complete proteome] [HAMAP] EMBL ABH00794.1

Taxonomic identifier

101510 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus › Rhodococcus jostii

Protein attributes

Sequence length	323 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABH00794.1
Technical term	Complete proteome Plasmid EMBL ABH00794.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0RV92 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: EEE6428CCDB329A2	FASTA	323	35,206
	10 20 30 40 50 60 MRLIAPMLAT AGTLPDNTDR PWSFEMKYDG CRMLASVGGG HEPVLWTRAM NVVTPSYPEI 70 80 90 100 110 120 AEALTAAFGG RGRIVLDGEV VVLDQGKPSF GLLQRRLGVA HATKPLQRRI PVTFLPFDVL 130 140 150 160 170 180 ALDGDDLTKA SYLERRAELA ELDSTIQDVG GLPITVPPHW DNQSSKIMLN AAKSAGMEGV 190 200 210 220 230 240 LAKRSTSLYL PGQRSRSWIK HAIRTRSSVL VIGFVGSSRS VAALILGAYD AEGRLVQVGS 250 260 270 280 290 300 VSSGLTVSMR RQLREDFRPL ERPSSPLTDP SAAAETFPGV QWLNPRLVVD VAYRAHTAGG 310 320 LRHPSLKGRR FDVDFQSVRV EDL

References

[1]

"The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse." McLeod M.P., Warren R.L., Hsiao W.W.L., Araki N., Myhre M., Fernandes C., Miyazawa D., Wong W., Lillquist A.L., Wang D., Dosanjh M., Hara H., Petrescu A., Morin R.D., Yang G., Stott J.M., Schein J.E., Shin H. , Smailus D., Siddiqui A.S., Marra M.A., Jones S.J.M., Holt R., Brinkman F.S.L., Miyauchi K., Fukuda M., Davies J.E., Mohn W.W., Eltis L.D. Proc. Natl. Acad. Sci. U.S.A. 103:15582-15587(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RHA1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000434 Genomic DNA. Translation: ABH00794.1.
RefSeq	YP_708952.1. NC_008271.1.
3D structure databases
ProteinModelPortal	Q0RV92.
ModBase	Search...
Protein-protein interaction databases
STRING	101510.RHA1_ro11147.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABH00794; ABH00794; RHA1_ro11147.
GeneID	4226588.
KEGG	rha:RHA1_ro11147.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222509.
KO	K01971.
OMA	EVEYLEW.
ProtClustDB	CLSK762775.
Enzyme and pathway databases
BioCyc	RJOS101510:GJJ1-9034-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0RV92_RHOSR

Accession

Primary (citable) accession number: Q0RV92

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)