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Q0RV92

- Q0RV92_RHOJR

UniProt

Q0RV92 - Q0RV92_RHOJR

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

RHA1_ro11147

Organism
Rhodococcus jostii (strain RHA1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRJOS101510:GJJ1-9034-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RHA1_ro11147Imported
Encoded oniPlasmid pRHL3Imported
OrganismiRhodococcus jostii (strain RHA1)Imported
Taxonomic identifieri101510 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
ProteomesiUP000008710: Plasmid pRHL3

PTM / Processingi

Proteomic databases

PRIDEiQ0RV92.

Interactioni

Protein-protein interaction databases

STRINGi101510.RHA1_ro11147.

Structurei

3D structure databases

ProteinModelPortaliQ0RV92.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222509.
KOiK01971.
OMAiGVRIITR.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0RV92-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRLIAPMLAT AGTLPDNTDR PWSFEMKYDG CRMLASVGGG HEPVLWTRAM
60 70 80 90 100
NVVTPSYPEI AEALTAAFGG RGRIVLDGEV VVLDQGKPSF GLLQRRLGVA
110 120 130 140 150
HATKPLQRRI PVTFLPFDVL ALDGDDLTKA SYLERRAELA ELDSTIQDVG
160 170 180 190 200
GLPITVPPHW DNQSSKIMLN AAKSAGMEGV LAKRSTSLYL PGQRSRSWIK
210 220 230 240 250
HAIRTRSSVL VIGFVGSSRS VAALILGAYD AEGRLVQVGS VSSGLTVSMR
260 270 280 290 300
RQLREDFRPL ERPSSPLTDP SAAAETFPGV QWLNPRLVVD VAYRAHTAGG
310 320
LRHPSLKGRR FDVDFQSVRV EDL
Length:323
Mass (Da):35,206
Last modified:September 5, 2006 - v1
Checksum:iEEE6428CCDB329A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000434 Genomic DNA. Translation: ABH00794.1.
RefSeqiYP_708952.1. NC_008271.1.

Genome annotation databases

EnsemblBacteriaiABH00794; ABH00794; RHA1_ro11147.
GeneIDi4226588.
KEGGirha:RHA1_ro11147.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000434 Genomic DNA. Translation: ABH00794.1 .
RefSeqi YP_708952.1. NC_008271.1.

3D structure databases

ProteinModelPortali Q0RV92.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 101510.RHA1_ro11147.

Proteomic databases

PRIDEi Q0RV92.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABH00794 ; ABH00794 ; RHA1_ro11147 .
GeneIDi 4226588.
KEGGi rha:RHA1_ro11147.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222509.
KOi K01971.
OMAi GVRIITR.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci RJOS101510:GJJ1-9034-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RHA1Imported.

Entry informationi

Entry nameiQ0RV92_RHOJR
AccessioniPrimary (citable) accession number: Q0RV92
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: November 26, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3