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Q0RT04 (Q0RT04_FRAAA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.4.99.16 EMBL CAJ59299.1
Gene names
Ordered Locus Names:FRAAL0625 EMBL CAJ59299.1
OrganismFrankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ59299.1
Taxonomic identifier326424 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length557 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q0RT04 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: A010F1C7685441CE

FASTA55762,511
        10         20         30         40         50         60 
MRLSRTADLW WKNAVIYCLD VETFADGNGD GCGDFRGLTQ RVDYLHELGV TCIWLMPFYP 

        70         80         90        100        110        120 
TPDRDDGYDI TDFYGVDPRL GTHGDLVEFL LVARDRGIRV IADLVVNHTS DQHPWFVSAR 

       130        140        150        160        170        180 
SSRDSPYRGY YVWRDEPPAD GPSDVVFPDQ EDSVWQYDDA AGQYYLHRFY KHQPDLDVAN 

       190        200        210        220        230        240 
PAVRDEIARI MGFWIALGLS GFRVDAVPFL LETDGAADAA DLPDPHEYLR DLRAFVSRRD 

       250        260        270        280        290        300 
GEVVLLGEVN LPYDDTRRFF GDEDGDELTM CFDFPGMQRL YLALARRDAT PLLEALRDRP 

       310        320        330        340        350        360 
AAPKDCHWAT FVRNHDELTL DKLDDGERQE VFAAFGPREE MQLYGRGLRR RLPPMLDGDP 

       370        380        390        400        410        420 
ARIRMVYSLL FALPGTPTLF YGEEIGMGEN LDIPGREAVR VPMQWSDGPN GGFSTVDPDA 

       430        440        450        460        470        480 
EADRLPAPVV QGEYGPAKVN VAAQRHDPTS LFSWVAALVR RYRQCPELAW GAGVTVDHDT 

       490        500        510        520        530        540 
ASVLAHWTEH DGRAVLTLHN FAAASASVTL RLPEVGAGAR FVELLGEQAG AVRTVDEDGS 

       550 
LRLDVDAYAA HWLRTES 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT573213 Genomic DNA. Translation: CAJ59299.1.
RefSeqYP_710906.1. NC_008278.1.

3D structure databases

ProteinModelPortalQ0RT04.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING326424.FRAAL0625.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4235022.
KEGGfal:FRAAL0625.
PATRIC21911193. VBIFraAln347_0568.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000220639.
KOK05343.
OMAEIGMGEN.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK818330.

Enzyme and pathway databases

BioCycFALN326424:GJ82-617-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameQ0RT04_FRAAA
AccessionPrimary (citable) accession number: Q0RT04
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: November 13, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)