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Protein
Submitted name:

Uncharacterized protein

Gene

FRAAL2048

Organism
Frankia alni (strain ACN14a)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. lyase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciFALN326424:GJ82-2012-MONOMER.

Protein family/group databases

CAZyiPL12. Polysaccharide Lyase Family 12.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:FRAAL2048Imported
OrganismiFrankia alni (strain ACN14a)Imported
Taxonomic identifieri326424 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000000657 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi326424.FRAAL2048.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5360.
HOGENOMiHOG000013409.
OMAiTEVWGAF.
OrthoDBiEOG6S267F.

Family and domain databases

Gene3Di1.50.10.110. 1 hit.
InterProiIPR008397. Alginate_lyase_dom.
IPR008929. Chondroitin_lyas.
IPR012480. Hepar_II_III.
[Graphical view]
PfamiPF07940. Hepar_II_III. 1 hit.
[Graphical view]
SUPFAMiSSF48230. SSF48230. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0RP37-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNPSTDLARY LRTVARLRPR QVAARARLRG QRAVLRRHPR LAVTMLRGRP
60 70 80 90 100
SSGSWPAGFV AVDETCPPAG PTVDELALGR LTLLGHARRL GHADPLDPVG
110 120 130 140 150
DVDDDLAGWD WEQAGAPLLW RYHLHYWDWA WALAPGGDRE RALFARLYLG
160 170 180 190 200
WRTAVAVGHP VAWSPYVASL RAWTLCALGP MLARDTPARD VLRADLGVHR
210 220 230 240 250
SFLRIHLETD VGGNHLVKNI KALIALAVAA DDPSGLHRRV DQLVRETRRQ
260 270 280 290 300
VLDDGGHYER SPSYHCQVLA DLDDVAGLLA AGGWAVPTEL FDAITRMRAW
310 320 330 340 350
LGAVLGPDGT VPLLNDGFAV RPELLRRLLP SVPAQPPPPG PEVDPSDRAT
360 370 380 390 400
GLADATSSTR ITRNTSSTGI TSLAGVPGRP GVPAAAGAGG WGRSGGLLLA
410 420 430 440 450
DSGLAALTAG GWHLLADVGL PCPDDLPAHA HADTLGFLLW LDDRPLLVDV
460 470 480 490 500
GTSTYAPGQR RDAERGSAAH STVTIDGVDS TEVWGAFRAG RRARPTLVTL
510 520 530 540 550
RHRDGVATLT AGHDGYRHLP GRPVHWRTWR LDADGLTVTD RISGGGRHQL
560 570 580 590 600
AVLFHFAPGV TLAAARRPDP GGPPEPAALD VTTPAGRRLL LRAGGPGRWH
610 620 630 640 650
VRTTRRATGW ERTVPAPTAE FRVDAELPVD LHATLTARAE AHPVDRSTAP
660 670 680
GRTATAPQLA VPHPRGTPRP LAAPRGADTD ADPPR
Length:685
Mass (Da):73,381
Last modified:September 4, 2006 - v1
Checksum:i606FB1DF1A116FB9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573213 Genomic DNA. Translation: CAJ60697.1.
RefSeqiYP_712278.1. NC_008278.1.

Genome annotation databases

KEGGifal:FRAAL2048.
PATRICi21913794. VBIFraAln347_1855.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573213 Genomic DNA. Translation: CAJ60697.1.
RefSeqiYP_712278.1. NC_008278.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi326424.FRAAL2048.

Protein family/group databases

CAZyiPL12. Polysaccharide Lyase Family 12.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGifal:FRAAL2048.
PATRICi21913794. VBIFraAln347_1855.

Phylogenomic databases

eggNOGiCOG5360.
HOGENOMiHOG000013409.
OMAiTEVWGAF.
OrthoDBiEOG6S267F.

Enzyme and pathway databases

BioCyciFALN326424:GJ82-2012-MONOMER.

Family and domain databases

Gene3Di1.50.10.110. 1 hit.
InterProiIPR008397. Alginate_lyase_dom.
IPR008929. Chondroitin_lyas.
IPR012480. Hepar_II_III.
[Graphical view]
PfamiPF07940. Hepar_II_III. 1 hit.
[Graphical view]
SUPFAMiSSF48230. SSF48230. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ACN14aImported.

Entry informationi

Entry nameiQ0RP37_FRAAA
AccessioniPrimary (citable) accession number: Q0RP37
Entry historyi
Integrated into UniProtKB/TrEMBL: September 4, 2006
Last sequence update: September 4, 2006
Last modified: March 31, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.