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Q0RP37 (Q0RP37_FRAAA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:FRAAL2048 EMBL CAJ60697.1
OrganismFrankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ60697.1
Taxonomic identifier326424 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length685 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processalginic acid catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentperiplasmic space

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpoly(beta-D-mannuronate) lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0RP37 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: 606FB1DF1A116FB9

FASTA68573,381
        10         20         30         40         50         60 
MNPSTDLARY LRTVARLRPR QVAARARLRG QRAVLRRHPR LAVTMLRGRP SSGSWPAGFV 

        70         80         90        100        110        120 
AVDETCPPAG PTVDELALGR LTLLGHARRL GHADPLDPVG DVDDDLAGWD WEQAGAPLLW 

       130        140        150        160        170        180 
RYHLHYWDWA WALAPGGDRE RALFARLYLG WRTAVAVGHP VAWSPYVASL RAWTLCALGP 

       190        200        210        220        230        240 
MLARDTPARD VLRADLGVHR SFLRIHLETD VGGNHLVKNI KALIALAVAA DDPSGLHRRV 

       250        260        270        280        290        300 
DQLVRETRRQ VLDDGGHYER SPSYHCQVLA DLDDVAGLLA AGGWAVPTEL FDAITRMRAW 

       310        320        330        340        350        360 
LGAVLGPDGT VPLLNDGFAV RPELLRRLLP SVPAQPPPPG PEVDPSDRAT GLADATSSTR 

       370        380        390        400        410        420 
ITRNTSSTGI TSLAGVPGRP GVPAAAGAGG WGRSGGLLLA DSGLAALTAG GWHLLADVGL 

       430        440        450        460        470        480 
PCPDDLPAHA HADTLGFLLW LDDRPLLVDV GTSTYAPGQR RDAERGSAAH STVTIDGVDS 

       490        500        510        520        530        540 
TEVWGAFRAG RRARPTLVTL RHRDGVATLT AGHDGYRHLP GRPVHWRTWR LDADGLTVTD 

       550        560        570        580        590        600 
RISGGGRHQL AVLFHFAPGV TLAAARRPDP GGPPEPAALD VTTPAGRRLL LRAGGPGRWH 

       610        620        630        640        650        660 
VRTTRRATGW ERTVPAPTAE FRVDAELPVD LHATLTARAE AHPVDRSTAP GRTATAPQLA 

       670        680 
VPHPRGTPRP LAAPRGADTD ADPPR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT573213 Genomic DNA. Translation: CAJ60697.1.
RefSeqYP_712278.1. NC_008278.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING326424.FRAAL2048.

Protein family/group databases

CAZyPL12. Polysaccharide Lyase Family 12.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4236408.
KEGGfal:FRAAL2048.
PATRIC21913794. VBIFraAln347_1855.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5360.
HOGENOMHOG000013409.
OMATEVWGAF.
OrthoDBEOG6S267F.

Enzyme and pathway databases

BioCycFALN326424:GJ82-2012-MONOMER.

Family and domain databases

Gene3D1.50.10.110. 1 hit.
InterProIPR008397. Alginate_lyase_dom.
IPR008929. Chondroitin_lyas.
IPR012480. Hepar_II_III.
[Graphical view]
PfamPF07940. Hepar_II_III. 1 hit.
[Graphical view]
SUPFAMSSF48230. SSF48230. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0RP37_FRAAA
AccessionPrimary (citable) accession number: Q0RP37
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)