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Q0RNX7

- Q0RNX7_FRAAA

UniProt

Q0RNX7 - Q0RNX7_FRAAA

Protein
Submitted name:

ATP-dependent DNA ligase (LigC)

Gene

lig

Organism
Frankia alni (strain ACN14a)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (05 Sep 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciFALN326424:GJ82-2073-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase (LigC)Imported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligImported
    Ordered Locus Names:FRAAL2110Imported
    OrganismiFrankia alni (strain ACN14a)Imported
    Taxonomic identifieri326424 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
    ProteomesiUP000000657: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi326424.FRAAL2110.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0RNX7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 2 hits.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0RNX7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGQYRAVDLP VVPPVKPMLA RAVAEIPPGL VYEPKWDGFR ALVFRDGDAV    50
    EITSRTTKSM TRYFPELVAA LRAVLPARCV LDGEIVVAGE HGLDFEALQQ 100
    RVHPAASRVA RLAAETQVSF VAFDLLAVGD RALLDEPFAR RRAELAELLR 150
    PGDAAGVRVH VTPATDDLDL ARRWFDQFEG AGLDGIIAKP PTGGYEPDRR 200
    TMFKIKHERT ADCVVAGYRP HKSGAGAVGS LLLGLYPDPD PDGTGTTADA 250
    DAGPGAGDPA GGSALAGAGL AAVGVTSAFA MARRRELVSE LAPLVIPIDE 300
    HPWAPAGSGG TRTPWDAGES RWAAGRDLSF VPLRPVLVAE VRYDHMEGPR 350
    FRHTTQFVRF RPDRDPHSCT FAQLERPVRV DLADVLR 387
    Length:387
    Mass (Da):41,710
    Last modified:September 5, 2006 - v1
    Checksum:iFD94C6EBDFC8BE66
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573213 Genomic DNA. Translation: CAJ60759.1.
    RefSeqiYP_712338.1. NC_008278.1.

    Genome annotation databases

    GeneIDi4237484.
    KEGGifal:FRAAL2110.
    PATRICi21913928. VBIFraAln347_1925.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573213 Genomic DNA. Translation: CAJ60759.1 .
    RefSeqi YP_712338.1. NC_008278.1.

    3D structure databases

    ProteinModelPortali Q0RNX7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 326424.FRAAL2110.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4237484.
    KEGGi fal:FRAAL2110.
    PATRICi 21913928. VBIFraAln347_1925.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci FALN326424:GJ82-2073-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 2 hits.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ACN14aImported.

    Entry informationi

    Entry nameiQ0RNX7_FRAAA
    AccessioniPrimary (citable) accession number: Q0RNX7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2006
    Last sequence update: September 5, 2006
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3