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Q0RNX7

- Q0RNX7_FRAAA

UniProt

Q0RNX7 - Q0RNX7_FRAAA

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Protein
Submitted name: ATP-dependent DNA ligase (LigC)
Gene
lig, FRAAL2110
Organism
Frankia alni (strain ACN14a)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciFALN326424:GJ82-2073-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase (LigC)Imported (EC:6.5.1.1Imported)
Gene namesi
Name:ligImported
Ordered Locus Names:FRAAL2110Imported
OrganismiFrankia alni (strain ACN14a)Imported
Taxonomic identifieri326424 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000000657: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326424.FRAAL2110.

Structurei

3D structure databases

ProteinModelPortaliQ0RNX7.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 2 hits.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0RNX7-1 [UniParc]FASTAAdd to Basket

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MGQYRAVDLP VVPPVKPMLA RAVAEIPPGL VYEPKWDGFR ALVFRDGDAV    50
EITSRTTKSM TRYFPELVAA LRAVLPARCV LDGEIVVAGE HGLDFEALQQ 100
RVHPAASRVA RLAAETQVSF VAFDLLAVGD RALLDEPFAR RRAELAELLR 150
PGDAAGVRVH VTPATDDLDL ARRWFDQFEG AGLDGIIAKP PTGGYEPDRR 200
TMFKIKHERT ADCVVAGYRP HKSGAGAVGS LLLGLYPDPD PDGTGTTADA 250
DAGPGAGDPA GGSALAGAGL AAVGVTSAFA MARRRELVSE LAPLVIPIDE 300
HPWAPAGSGG TRTPWDAGES RWAAGRDLSF VPLRPVLVAE VRYDHMEGPR 350
FRHTTQFVRF RPDRDPHSCT FAQLERPVRV DLADVLR 387
Length:387
Mass (Da):41,710
Last modified:September 5, 2006 - v1
Checksum:iFD94C6EBDFC8BE66
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT573213 Genomic DNA. Translation: CAJ60759.1.
RefSeqiYP_712338.1. NC_008278.1.

Genome annotation databases

GeneIDi4237484.
KEGGifal:FRAAL2110.
PATRICi21913928. VBIFraAln347_1925.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT573213 Genomic DNA. Translation: CAJ60759.1 .
RefSeqi YP_712338.1. NC_008278.1.

3D structure databases

ProteinModelPortali Q0RNX7.
ModBasei Search...

Protein-protein interaction databases

STRINGi 326424.FRAAL2110.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4237484.
KEGGi fal:FRAAL2110.
PATRICi 21913928. VBIFraAln347_1925.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci FALN326424:GJ82-2073-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 2 hits.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ACN14a.

Entry informationi

Entry nameiQ0RNX7_FRAAA
AccessioniPrimary (citable) accession number: Q0RNX7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: May 14, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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