Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q0RNX7

- Q0RNX7_FRAAA

UniProt

Q0RNX7 - Q0RNX7_FRAAA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

ATP-dependent DNA ligase (LigC)

Gene

lig

Organism
Frankia alni (strain ACN14a)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciFALN326424:GJ82-2073-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase (LigC)Imported (EC:6.5.1.1Imported)
Gene namesi
Name:ligImported
Ordered Locus Names:FRAAL2110Imported
OrganismiFrankia alni (strain ACN14a)Imported
Taxonomic identifieri326424 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000000657: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326424.FRAAL2110.

Structurei

3D structure databases

ProteinModelPortaliQ0RNX7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 2 hits.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0RNX7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGQYRAVDLP VVPPVKPMLA RAVAEIPPGL VYEPKWDGFR ALVFRDGDAV
60 70 80 90 100
EITSRTTKSM TRYFPELVAA LRAVLPARCV LDGEIVVAGE HGLDFEALQQ
110 120 130 140 150
RVHPAASRVA RLAAETQVSF VAFDLLAVGD RALLDEPFAR RRAELAELLR
160 170 180 190 200
PGDAAGVRVH VTPATDDLDL ARRWFDQFEG AGLDGIIAKP PTGGYEPDRR
210 220 230 240 250
TMFKIKHERT ADCVVAGYRP HKSGAGAVGS LLLGLYPDPD PDGTGTTADA
260 270 280 290 300
DAGPGAGDPA GGSALAGAGL AAVGVTSAFA MARRRELVSE LAPLVIPIDE
310 320 330 340 350
HPWAPAGSGG TRTPWDAGES RWAAGRDLSF VPLRPVLVAE VRYDHMEGPR
360 370 380
FRHTTQFVRF RPDRDPHSCT FAQLERPVRV DLADVLR
Length:387
Mass (Da):41,710
Last modified:September 5, 2006 - v1
Checksum:iFD94C6EBDFC8BE66
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573213 Genomic DNA. Translation: CAJ60759.1.
RefSeqiWP_011603275.1. NC_008278.1.
YP_712338.1. NC_008278.1.

Genome annotation databases

GeneIDi4237484.
KEGGifal:FRAAL2110.
PATRICi21913928. VBIFraAln347_1925.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573213 Genomic DNA. Translation: CAJ60759.1 .
RefSeqi WP_011603275.1. NC_008278.1.
YP_712338.1. NC_008278.1.

3D structure databases

ProteinModelPortali Q0RNX7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 326424.FRAAL2110.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4237484.
KEGGi fal:FRAAL2110.
PATRICi 21913928. VBIFraAln347_1925.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci FALN326424:GJ82-2073-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 2 hits.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ACN14aImported.

Entry informationi

Entry nameiQ0RNX7_FRAAA
AccessioniPrimary (citable) accession number: Q0RNX7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: October 29, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3