Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q0RNX7 (Q0RNX7_FRAAA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=6.5.1.1 EMBL CAJ60759.1
Gene names
Name:lig EMBL CAJ60759.1
Ordered Locus Names:FRAAL2110 EMBL CAJ60759.1
OrganismFrankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ60759.1
Taxonomic identifier326424 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length387 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CAJ60759.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0RNX7 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: FD94C6EBDFC8BE66

FASTA38741,710
        10         20         30         40         50         60 
MGQYRAVDLP VVPPVKPMLA RAVAEIPPGL VYEPKWDGFR ALVFRDGDAV EITSRTTKSM 

        70         80         90        100        110        120 
TRYFPELVAA LRAVLPARCV LDGEIVVAGE HGLDFEALQQ RVHPAASRVA RLAAETQVSF 

       130        140        150        160        170        180 
VAFDLLAVGD RALLDEPFAR RRAELAELLR PGDAAGVRVH VTPATDDLDL ARRWFDQFEG 

       190        200        210        220        230        240 
AGLDGIIAKP PTGGYEPDRR TMFKIKHERT ADCVVAGYRP HKSGAGAVGS LLLGLYPDPD 

       250        260        270        280        290        300 
PDGTGTTADA DAGPGAGDPA GGSALAGAGL AAVGVTSAFA MARRRELVSE LAPLVIPIDE 

       310        320        330        340        350        360 
HPWAPAGSGG TRTPWDAGES RWAAGRDLSF VPLRPVLVAE VRYDHMEGPR FRHTTQFVRF 

       370        380 
RPDRDPHSCT FAQLERPVRV DLADVLR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT573213 Genomic DNA. Translation: CAJ60759.1.
RefSeqYP_712338.1. NC_008278.1.

3D structure databases

ProteinModelPortalQ0RNX7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING326424.FRAAL2110.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4237484.
KEGGfal:FRAAL2110.
PATRIC21913928. VBIFraAln347_1925.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OMAERTADCV.
OrthoDBEOG63NMFT.
ProtClustDBPRK08224.

Enzyme and pathway databases

BioCycFALN326424:GJ82-2073-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 2 hits.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0RNX7_FRAAA
AccessionPrimary (citable) accession number: Q0RNX7
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: November 13, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)