Q0RNI4 (Q0RNI4_FRAAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
GTPase Der RuleBase RU004481

Gene names

Ordered Locus Names:

FRAAL2255

Organism

Frankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ60904.1

Taxonomic identifier

326424 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	502 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	GTPase that plays an essential role in the late steps of ribosome biogenesis By similarity. RuleBase RU004481
Sequence similarities	Belongs to the Era/MnmE GTP-binding protein family. Der subfamily. RuleBase RU004481

Ontologies

Keywords
Domain	Repeat RuleBase RU004481
Ligand	GTP-binding RuleBase RU004481 Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	GTP binding Inferred from electronic annotation. Source: UniProtKB-KW nucleoside-triphosphatase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0RNI4 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 398CA3575316CEA1	FASTA	502	53,718
	10 20 30 40 50 60 MAVMAVMSRQ DAAMDGAEAA SGDDLRNADL RGAELGADEL GADELGADEL GADELGPVTG 70 80 90 100 110 120 QPVVAVVGRP NVGKSTLVNR ILGRRAAVVE DVPGVTRDRI AYDAVWNGRR FTLVDTGGWE 130 140 150 160 170 180 PDASGLAAQV SEQASAALDT ADAVLFIVDV TTGATDADEA VARVLHRSGL PVILVANKVD 190 200 210 220 230 240 DNRFESDAAA LWGLGLGEPH PVSALHGRGS GDLLDAVLAV LPEAPREVFT ETDGPRRVAL 250 260 270 280 290 300 IGRPNVGKSS LLNKIAGSRR SLVHDVAGTT RDPVDELVTV GGEEWMFIDT AGLRRRIREA 310 320 330 340 350 360 SGAEYYSSLR TAAALEAAEV AIVLLAADEP LTEQDQRVIT MVIEAGRALV IAFNKWDLVD 370 380 390 400 410 420 EDRRYTLERE IDRDLGRIAW APRVNISART GRATDRLAPA LRTALESWGT RIPTGRLNTW 430 440 450 460 470 480 LGEVVGATPP PARGGKVPKI LFATQAGVRP PRFVVFTTGF LEPAYRRFLE RRLREDFGFA 490 500 GSPIAISVRV RERGDRRSPT AG

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT573213 Genomic DNA. Translation: CAJ60904.1.
RefSeq	YP_712481.1. NC_008278.1.
3D structure databases
ProteinModelPortal	Q0RNI4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0RNI4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4235082.
GenomeReviews	Gene locus FRAAL2255 in contig CT573213_GR.
KEGG	fal:FRAAL2255.
PATRIC	21914208. VBIFraAln347_2061.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1160.
HOGENOM	HBG592135.
OMA	QGADFYA.
ProtClustDB	PRK03003.
Family and domain databases
HAMAP	MF_00195. GTPase_Der. [Tree]
InterPro	IPR003593. ATPase_AAA+_core. IPR016484. GTP-bd_EngA. IPR006073. GTP_binding_domain. IPR015946. KH_dom-like_a/b. IPR005225. Small_GTP-bd_dom. [Graphical view]
Gene3D	G3DSA:3.30.300.20. KH_prok. 1 hit.
KO	K03977.
PANTHER	PTHR11649:SF5. PTHR11649:SF5. 1 hit.
Pfam	PF01926. MMR_HSR1. 2 hits. [Graphical view]
PIRSF	PIRSF006485. GTP-binding_EngA. 1 hit.
PRINTS	PR00326. GTP1OBG.
SMART	SM00382. AAA. 2 hits. [Graphical view]
TIGRFAMs	TIGR03594. GTPase_EngA. 1 hit. TIGR00231. Small_GTP. 2 hits.
ProtoNet	Search...

Entry information

Entry name

Q0RNI4_FRAAA

Accession

Primary (citable) accession number: Q0RNI4

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)