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Protein
Submitted name:

Frankia alni str. ACN14A chromosome, complete sequence

Gene

FRAAL3904

Organism
Frankia alni (strain ACN14a)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciFALN326424:GJ82-3850-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Frankia alni str. ACN14A chromosome, complete sequenceImported
Gene namesi
Ordered Locus Names:FRAAL3904Imported
OrganismiFrankia alni (strain ACN14a)Imported
Taxonomic identifieri326424 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaFrankialesFrankiaceaeFrankia
ProteomesiUP000000657 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326424.FRAAL3904.

Structurei

3D structure databases

ProteinModelPortaliQ0RIW8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000119511.
OMAiESVHETR.
OrthoDBiEOG6GJBPF.

Family and domain databases

Gene3Di3.30.450.40. 2 hits.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR003594. HATPase_C.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF13185. GAF_2. 1 hit.
PF13581. HATPase_c_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 2 hits.
SM00387. HATPase_c. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55874. SSF55874. 1 hit.
SSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0RIW8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLDGRSGGV DRVRRLAVRM LAGTRWEPVV DDVRLVLSEL TTNALLHGAA
60 70 80 90 100
PIEVRILTGG EALRVEVSDS SQTMPLRPPA GGDGLTGRGM ALVAASATRW
110 120 130 140 150
GVQPAAAGKI VWAEFTGDDD GAGAVTGKAA DAVTGTSAGA VTGKDDGAGE
160 170 180 190 200
GRPSGSHRGR TSRARTPPTP RRPDASAQDG GSAQDGGSTQ DGGSAQDGGS
210 220 230 240 250
ARTVGIRGMS GLRGVGTIVV SAGGQPTAMP GHLVRLGDVP TELLLAAKHH
260 270 280 290 300
VDGLVREFAL AAGGAASGTS AAVPERLAEL LGTVTTRFAG PRQAIKRQAL
310 320 330 340 350
AAAAAGRPRT PLELVLPLST AADAEQYLAA LEEIEDYARA ARLLTLESPP
360 370 380 390 400
QHVAFRRWYI GSLVDQLRAA ERGEGTLRTR SFEQYLLDTL DVVVAAQRTA
410 420 430 440 450
ERSARLQRVT AALARATTPE QVAAAVVSQG AKALGASGGV LMIPQGAGRL
460 470 480 490 500
AIPGAVGYGE SMIAALRAER LDDRLPAMDA LRSGEPVWLE SRRERDARYP
510 520 530 540 550
DLAELEPTAV SMCVLPLFVG DRTLGALRFS FDHSRLFDDD ERAFVQALAT
560 570 580 590 600
QAALALERAR LFTVEREARE RTTLFAAATD LFTSTLDTRR ILEHLVSLLV
610 620 630 640 650
PWHAGQAAAC RFDEEGGVEI VAVADRADPL STVAVSAIPG RHLAAAPTRG
660 670 680 690 700
QLGGRGVPDS GGMTQALRTG RPARSPDGTR LALPMVLGGR PVAAVGLAAA
710 720 730 740 750
EGRAYADDEQ RVVAELVDRA TVAIGNARQY EQERRTAVTL QRSLLPQRLP
760 770 780 790 800
EIPGLAFAWR YLPGSAGALV GGDWYDVLPL DDGRIALVIG DVMGHGIHAA
810 820 830 840 850
ATMGQLRAAV RAHAVAQTSP GAVLALLDAA ANRLEQGRIA TAAFALLDPA
860 870 880 890 900
SGRLVLASAG HLPPLLIPPH DPAHYLHLEP GPPLSAGLPD YPETAVTVAP
910 920 930 940 950
GSTLLFFTDG LVEDRRRPVD EGMELLRAGA AAHGTPEEVC DRALAALGRD
960
ADTEDDTALL AVRLG
Length:965
Mass (Da):100,697
Last modified:September 5, 2006 - v1
Checksum:i6B2073F3FAA8653C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573213 Genomic DNA. Translation: CAJ62547.1.
RefSeqiWP_011605039.1. NC_008278.1.
YP_714105.1. NC_008278.1.

Genome annotation databases

KEGGifal:FRAAL3904.
PATRICi21917282. VBIFraAln347_3597.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573213 Genomic DNA. Translation: CAJ62547.1.
RefSeqiWP_011605039.1. NC_008278.1.
YP_714105.1. NC_008278.1.

3D structure databases

ProteinModelPortaliQ0RIW8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi326424.FRAAL3904.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGifal:FRAAL3904.
PATRICi21917282. VBIFraAln347_3597.

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000119511.
OMAiESVHETR.
OrthoDBiEOG6GJBPF.

Enzyme and pathway databases

BioCyciFALN326424:GJ82-3850-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 2 hits.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR003594. HATPase_C.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF13185. GAF_2. 1 hit.
PF13581. HATPase_c_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 2 hits.
SM00387. HATPase_c. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55874. SSF55874. 1 hit.
SSF81606. SSF81606. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ACN14aImported.

Entry informationi

Entry nameiQ0RIW8_FRAAA
AccessioniPrimary (citable) accession number: Q0RIW8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: June 24, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.