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Q0RHK2

- Q0RHK2_FRAAA

UniProt

Q0RHK2 - Q0RHK2_FRAAA

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Protein
Submitted name:

Uncharacterized protein

Gene

FRAAL4382

Organism
Frankia alni (strain ACN14a)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciFALN326424:GJ82-4317-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:FRAAL4382Imported
OrganismiFrankia alni (strain ACN14a)Imported
Taxonomic identifieri326424 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000000657: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326424.FRAAL4382.

Structurei

3D structure databases

ProteinModelPortaliQ0RHK2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222509.
KOiK01971.
OMAiMVHRMDP.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0RHK2-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MGSDDAGGDH ARGSRLAEYR SRRHSGRTPE PDVSPLADAG DDGGRRTPRS
60 70 80 90 100
QERPTSPAPP PPDHTGDDQN GRGDRFVIHE HHARRLHWDV RLERDGVLVS
110 120 130 140 150
WAVPRGLPTD SRRNHLAVRT EDHPLAYADF AGTIPKGEYG AGEVSVWDRG
160 170 180 190 200
RYRLESWSAE KVKVTLLGER VQGRYAFFAT GRAHGGGTGS DQRSDRGDRN
210 220 230 240 250
WMVHRMDPRG DTDPGGTDPD GTGQPRRAGR PARTDPARSP DLPGGTESRD
260 270 280 290 300
SMDPPGDPER TPMPGRMAPM LAVPAAAPPE GDDWAYEVKW DGVRALAFVD
310 320 330 340 350
GGRPRLRSRS GHDVTDVFPE LHTLGPAFGA TQVILDGEIV AFGPAGTPDF
360 370 380 390 400
ELLSHRVHIA TPAIARRAAA TIPVRYLVFD LLFLDGHSLL AWPYSGRRAL
410 420 430 440 450
LADLADRGRL RISEELVGTG DEVVAASAAA GLEGVVAKRR SSPYQPGRRS
460 470 480 490 500
VDWVKVRHVR RQSVLVGGWE PGTGRRADRI GALLVGVATP AGPRYAGQVG
510 520 530 540 550
TGFSEATLDR LAALLAPLRR SDPPLRDVPA EVARGAVWVD PELIAEVEFT
560 570 580
SWTTDGRLRH PSFQGLRIDI SPADTARMEE T
Length:581
Mass (Da):63,077
Last modified:September 5, 2006 - v1
Checksum:i7B0B2F6E91E3D2CB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT573213 Genomic DNA. Translation: CAJ63024.1.
RefSeqiYP_714572.1. NC_008278.1.

Genome annotation databases

GeneIDi4237124.
KEGGifal:FRAAL4382.
PATRICi21918156. VBIFraAln347_4034.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT573213 Genomic DNA. Translation: CAJ63024.1 .
RefSeqi YP_714572.1. NC_008278.1.

3D structure databases

ProteinModelPortali Q0RHK2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 326424.FRAAL4382.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4237124.
KEGGi fal:FRAAL4382.
PATRICi 21918156. VBIFraAln347_4034.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222509.
KOi K01971.
OMAi MVHRMDP.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci FALN326424:GJ82-4317-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ACN14aImported.

Entry informationi

Entry nameiQ0RHK2_FRAAA
AccessioniPrimary (citable) accession number: Q0RHK2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: October 1, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3