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Q0RHK2 (Q0RHK2_FRAAA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:FRAAL4382 EMBL CAJ63024.1
OrganismFrankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ63024.1
Taxonomic identifier326424 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length581 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q0RHK2 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: 7B0B2F6E91E3D2CB

FASTA58163,077
        10         20         30         40         50         60 
MGSDDAGGDH ARGSRLAEYR SRRHSGRTPE PDVSPLADAG DDGGRRTPRS QERPTSPAPP 

        70         80         90        100        110        120 
PPDHTGDDQN GRGDRFVIHE HHARRLHWDV RLERDGVLVS WAVPRGLPTD SRRNHLAVRT 

       130        140        150        160        170        180 
EDHPLAYADF AGTIPKGEYG AGEVSVWDRG RYRLESWSAE KVKVTLLGER VQGRYAFFAT 

       190        200        210        220        230        240 
GRAHGGGTGS DQRSDRGDRN WMVHRMDPRG DTDPGGTDPD GTGQPRRAGR PARTDPARSP 

       250        260        270        280        290        300 
DLPGGTESRD SMDPPGDPER TPMPGRMAPM LAVPAAAPPE GDDWAYEVKW DGVRALAFVD 

       310        320        330        340        350        360 
GGRPRLRSRS GHDVTDVFPE LHTLGPAFGA TQVILDGEIV AFGPAGTPDF ELLSHRVHIA 

       370        380        390        400        410        420 
TPAIARRAAA TIPVRYLVFD LLFLDGHSLL AWPYSGRRAL LADLADRGRL RISEELVGTG 

       430        440        450        460        470        480 
DEVVAASAAA GLEGVVAKRR SSPYQPGRRS VDWVKVRHVR RQSVLVGGWE PGTGRRADRI 

       490        500        510        520        530        540 
GALLVGVATP AGPRYAGQVG TGFSEATLDR LAALLAPLRR SDPPLRDVPA EVARGAVWVD 

       550        560        570        580 
PELIAEVEFT SWTTDGRLRH PSFQGLRIDI SPADTARMEE T 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT573213 Genomic DNA. Translation: CAJ63024.1.
RefSeqYP_714572.1. NC_008278.1.

3D structure databases

ProteinModelPortalQ0RHK2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING326424.FRAAL4382.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4237124.
KEGGfal:FRAAL4382.
PATRIC21918156. VBIFraAln347_4034.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMAMVHRMDP.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycFALN326424:GJ82-4317-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0RHK2_FRAAA
AccessionPrimary (citable) accession number: Q0RHK2
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: May 14, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)