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Q0RHK2

- Q0RHK2_FRAAA

UniProt

Q0RHK2 - Q0RHK2_FRAAA

Protein
Submitted name:

Uncharacterized protein

Gene

FRAAL4382

Organism
Frankia alni (strain ACN14a)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (05 Sep 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Enzyme and pathway databases

    BioCyciFALN326424:GJ82-4317-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:FRAAL4382Imported
    OrganismiFrankia alni (strain ACN14a)Imported
    Taxonomic identifieri326424 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
    ProteomesiUP000000657: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi326424.FRAAL4382.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0RHK2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiMVHRMDP.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0RHK2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGSDDAGGDH ARGSRLAEYR SRRHSGRTPE PDVSPLADAG DDGGRRTPRS    50
    QERPTSPAPP PPDHTGDDQN GRGDRFVIHE HHARRLHWDV RLERDGVLVS 100
    WAVPRGLPTD SRRNHLAVRT EDHPLAYADF AGTIPKGEYG AGEVSVWDRG 150
    RYRLESWSAE KVKVTLLGER VQGRYAFFAT GRAHGGGTGS DQRSDRGDRN 200
    WMVHRMDPRG DTDPGGTDPD GTGQPRRAGR PARTDPARSP DLPGGTESRD 250
    SMDPPGDPER TPMPGRMAPM LAVPAAAPPE GDDWAYEVKW DGVRALAFVD 300
    GGRPRLRSRS GHDVTDVFPE LHTLGPAFGA TQVILDGEIV AFGPAGTPDF 350
    ELLSHRVHIA TPAIARRAAA TIPVRYLVFD LLFLDGHSLL AWPYSGRRAL 400
    LADLADRGRL RISEELVGTG DEVVAASAAA GLEGVVAKRR SSPYQPGRRS 450
    VDWVKVRHVR RQSVLVGGWE PGTGRRADRI GALLVGVATP AGPRYAGQVG 500
    TGFSEATLDR LAALLAPLRR SDPPLRDVPA EVARGAVWVD PELIAEVEFT 550
    SWTTDGRLRH PSFQGLRIDI SPADTARMEE T 581
    Length:581
    Mass (Da):63,077
    Last modified:September 5, 2006 - v1
    Checksum:i7B0B2F6E91E3D2CB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573213 Genomic DNA. Translation: CAJ63024.1.
    RefSeqiYP_714572.1. NC_008278.1.

    Genome annotation databases

    GeneIDi4237124.
    KEGGifal:FRAAL4382.
    PATRICi21918156. VBIFraAln347_4034.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573213 Genomic DNA. Translation: CAJ63024.1 .
    RefSeqi YP_714572.1. NC_008278.1.

    3D structure databases

    ProteinModelPortali Q0RHK2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 326424.FRAAL4382.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4237124.
    KEGGi fal:FRAAL4382.
    PATRICi 21918156. VBIFraAln347_4034.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi MVHRMDP.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci FALN326424:GJ82-4317-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ACN14aImported.

    Entry informationi

    Entry nameiQ0RHK2_FRAAA
    AccessioniPrimary (citable) accession number: Q0RHK2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2006
    Last sequence update: September 5, 2006
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3