Q0RHH7 (Q0RHH7_FRAAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase III alpha subunit EMBL CAJ63049.1
EC=2.7.7.7 EMBL CAJ63049.1

Gene names

Name:	dnaE EMBL CAJ63049.1
Ordered Locus Names:	FRAAL4407

Organism

Frankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ63049.1

Taxonomic identifier

326424 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	1177 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). SAAS SAAS004013

Ontologies

Keywords
Biological process	DNA replication SAAS SAAS004013
Cellular component	Cytoplasm SAAS SAAS004013
Molecular function	DNA-directed DNA polymerase SAAS SAAS004013 Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	3'-5' exonuclease activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0RHH7 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 5D742E2C690887C4	FASTA	1,177	130,172
	10 20 30 40 50 60 MSNSFVHLHV HTEYSMLDGA ARLKDMFSEV SRQQMPAVAI TDHGYMYGAY DFHKQATAAG 70 80 90 100 110 120 VKPIIGCEAY VAPESRLLKQ RVRWGEPHQK SDDVSGGGSY THMTMWARNA DGLKNLFRLN 130 140 150 160 170 180 SRASIEGHYI KWPRMDQEII AEHADGLMAT TGCPSGIVQT RLRLGQYDAA LQAAATYQEI 190 200 210 220 230 240 FGKENFFCEI MDHGLDIERR VRDGLVDIAR ALDMRFVVTN DSHYTYEHER DAHAALLCVQ 250 260 270 280 290 300 TASTVANPSF QFEGSGYFLK SAEEMYGIDS SDIWQEGCET TLLIAERVDP TGMFAKHNLM 310 320 330 340 350 360 PRFPVPDGET EESWFRAETW AGMDRRFPQG FDDEHRERVE YEIRVILQMG FPSYFLVVAD 370 380 390 400 410 420 FIMWAKAQGI PVGPGRGSAA GSMVAFALGI TDLDPIPHSL LFERFLNPER VSMPDIDIDF 430 440 450 460 470 480 DERRRGDVIR YVTERWGDDR IAQIVTFGTI KAKAAIKDSS RVLGYPYAVG DRITKAMPPA 490 500 510 520 530 540 VMGKDIPLGG IFDPKHPRFS EAGEIRGLYE SDADVKKVIE TAKGLEGLIR QAGVHAAGVI 550 560 570 580 590 600 MSAEPIIDHI PVWRRDADGA IITQFDYPTC ETLGLLKMDF LGLRNLTVMD DAVRNVEANR 610 620 630 640 650 660 GITIDLLGLT LDDPAAYELL GRGDTLGVFQ LDGGPMRSLL RMMRPDNFED ISAVLALYRP 670 680 690 700 710 720 GPMGANSHIN YALRKNGQQE ITPIHPELSE ALADILDTTY GLIVYQEQVM AIAQKVAGYS 730 740 750 760 770 780 LGGADLLRRA MGKKKKEILD KEFVPFSEGM KNSGYSEAAI KTLWDILVPF SDYAFNKAHT 790 800 810 820 830 840 AGYGLVSYWT AYLKANYPAE YMAALLTSVR DDKDKSAIYL NECRRMGIRV LPPDVNSSNA 850 860 870 880 890 900 DYTAHGAAEI RVGLAAIRNV GTNVVESIVR TRKSKSRFVS FPDFLDKVDA VVCNKRTIES 910 920 930 940 950 960 LIKAGAFDAL GHTRRGLVER HEQAVDAVMG VKKKNAEGQF DLFALDADDD PGAAPVFGVQ 970 980 990 1000 1010 1020 EFSDQEWDKA VKLSHEREML GLYVSDHPLR EVEHILTARA DCSIAALTGG EYADGSTVTI 1030 1040 1050 1060 1070 1080 AGIISSLQRK VTKQGKLWAL TTVEDLAGGL EVMFFPQTYE VCSTQLAEDA VVIVRGRLDK 1090 1100 1110 1120 1130 1140 REDTPRLIAS ELTVPDLSEA ALSPPVVITM SAARVNPPTV ERLREVLGTH PGTTEVHLRL 1150 1160 1170 QTPGQTTVLR LDDAYKVQRT PALMGDLKAL LGAAAVA

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT573213 Genomic DNA. Translation: CAJ63049.1.
RefSeq	YP_714599.1. NC_008278.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q0RHH7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4236467.
GenomeReviews	Gene locus FRAAL4407 in contig CT573213_GR.
KEGG	fal:FRAAL4407.
PATRIC	21918204. VBIFraAln347_4058.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0587.
HOGENOM	HBG734490.
OMA	RVLQMPY.
PhylomeDB	Q0RHH7.
ProtClustDB	PRK05673.
Family and domain databases
InterPro	IPR011708. DNA_pol3_alpha. IPR004365. NA-bd_OB_tRNA-helicase. IPR004013. PHP_C. IPR003141. Pol/His_phosphatase_N. IPR016195. Pol/histidinol_Pase-like. IPR004805. PolC_alpha. [Graphical view]
KO	K02337.
Pfam	PF07733. DNA_pol3_alpha. 1 hit. PF02811. PHP. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
SMART	SM00481. POLIIIAc. 1 hit. [Graphical view]
SUPFAM	SSF89550. PHP-like. 1 hit.
TIGRFAMs	TIGR00594. Polc. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0RHH7_FRAAA

Accession

Primary (citable) accession number: Q0RHH7

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)