Putative Bacteriophytochrome (Phytochrome-like protein)

Preferred order of sections

Names and origin

Protein names

Submitted name:
Putative Bacteriophytochrome (Phytochrome-like protein) EMBL CAJ63967.1
EC=2.7.3.- EMBL CAJ63967.1

Gene names

Ordered Locus Names:

FRAAL5334

Organism

Frankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ63967.1

Taxonomic identifier

326424 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia ›

Protein attributes

Sequence length	783 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Sensory transduction
Ligand	Chromophore
Molecular function	Photoreceptor protein RuleBase RU003590 Receptor Transferase EMBL CAJ63967.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	detection of visible light Inferred from electronic annotation. Source: InterPro protein-chromophore linkage Inferred from electronic annotation. Source: UniProtKB-KW regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular_function	photoreceptor activity Inferred from electronic annotation. Source: UniProtKB-KW transferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q0REY5 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: 22ADA252B201818F
Show »

FASTA

783

84,192

        10         20         30         40         50         60 
MSGAGEFPEM PPPEPVDLTN CDREPIHIPG SVQPHGVLLA VRADDDLTVV QVSANIAETL 

        70         80         90        100        110        120 
GREAAATIGR PLRELVGDAA AKAVRDVVRT AFDLRGAGPV DLVVGDGHDL RRYDALLHRV 

       130        140        150        160        170        180 
GEQVVIELQA ARSTRPLSYS GTYARTRQSV LRLSSSSSLT ELYDVVVEEV RRLTGFDRVM 

       190        200        210        220        230        240 
VYRFDAAWNG EVVAEAKLDR LNSFHGLHYP ATDIPAQARA LYERSWLRLI PDVDYRPVPL 

       250        260        270        280        290        300 
VPAVNIVTGG PLDLSDAWLR SVSPIHIEYL QNMGVTASMS ISLLRDGRLW GLIACHHYSG 

       310        320        330        340        350        360 
RHEPGYEICA AAEFLGHLFS LRLVSRENEQ TLESTLATRE ALDQILVEAQ SGGALLVDVL 

       370        380        390        400        410        420 
TSGGPNLADL IDCGGVSVAI DGEYRTFGAV PPREAQRAAF DALGTEGAIL ACDALPRDAP 

       430        440        450        460        470        480 
HMAEHRDVAC GILAFRLSGD EGVAWFRPET VRTVDWGGDP RNKELNAREA AGVRLSPRRS 

       490        500        510        520        530        540 
FDRWREVVRD RARPWSAHDL AIAAELRQHL LRLVYPGARR GADLARLMQE SLLPERLPPI 

       550        560        570        580        590        600 
PGFEIEAWYD PAAAGRVGGD WYDAVPMPDG RVALIVGDVA GHGVAAAGTM AQLRNALRAY 

       610        620        630        640        650        660 
VVDVDPADPR PARSVLDRLD RLAAALLPEA IATVAVAVTD PVTGLAQIAS SGHPPPVLLS 

       670        680        690        700        710        720 
AVGEPVVVEV EIAPPVGAAI PGLAATRPPA TAGEAVDAPG GWTARVRLAP GDALALFSDG 

       730        740        750        760        770        780 
LTERRTEAPD VGIERLRAQA DGAAAAHPDL RGLGDSLFRT CRDPDNDDDA TLLLLRRRPP 


HQP

« Hide

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography."
Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y.

Benson D.R.
Genome Res. 17:7-15(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ACN14a.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT573213 Genomic DNA. Translation: CAJ63967.1.
RefSeq	YP_715500.1. NC_008278.1.
3D structure databases
ProteinModelPortal	Q0REY5.
ModBase	Search...
Protein-protein interaction databases
STRING	326424.FRAAL5334.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4231042.
KEGG	fal:FRAAL5334.
PATRIC	21919880. VBIFraAln347_4890.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4251.
HOGENOM	HOG000266441.
OMA	LMSAKED.
ProtClustDB	CLSK957307.
Enzyme and pathway databases
BioCyc	FALN326424:GJ82-5252-MONOMER.
Family and domain databases
InterPro	IPR003018. GAF. IPR000014. PAS. IPR013654. PAS_2. IPR016132. Phyto_chromo_attachment. IPR001294. Phytochrome. IPR013515. Phytochrome_cen-reg. IPR001932. PP2C-like. [Graphical view]
Pfam	PF01590. GAF. 1 hit. PF08446. PAS_2. 1 hit. PF00360. PHY. 1 hit. PF07228. SpoIIE. 1 hit. [Graphical view]
PRINTS	PR01033. PHYTOCHROME.
SMART	SM00065. GAF. 1 hit. SM00091. PAS. 1 hit. SM00331. PP2C_SIG. 1 hit. [Graphical view]
SUPFAM	SSF81606. PP2C-related. 1 hit.
PROSITE	PS50046. PHYTOCHROME_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0REY5_FRAAA

Accession

Primary (citable) accession number: Q0REY5

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	May 29, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information