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Protein
Submitted name:

Putative Bacteriophytochrome (Phytochrome-like protein)

Gene

FRAAL5334

Organism
Frankia alni (strain ACN14a)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. photoreceptor activity Source: UniProtKB-KW
  2. transferase activity Source: UniProtKB-KW

GO - Biological processi

  1. detection of visible light Source: InterPro
  2. protein-chromophore linkage Source: UniProtKB-KW
  3. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Photoreceptor proteinUniRule annotation, Receptor, TransferaseImported

Keywords - Biological processi

Sensory transduction

Keywords - Ligandi

Chromophore

Enzyme and pathway databases

BioCyciFALN326424:GJ82-5252-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative Bacteriophytochrome (Phytochrome-like protein)Imported (EC:2.7.3.-Imported)
Gene namesi
Ordered Locus Names:FRAAL5334Imported
OrganismiFrankia alni (strain ACN14a)Imported
Taxonomic identifieri326424 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000000657 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326424.FRAAL5334.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4251.
HOGENOMiHOG000266441.
OMAiADCAREP.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000014. PAS.
IPR013654. PAS_2.
IPR016132. Phyto_chromo_attachment.
IPR001294. Phytochrome.
IPR013515. Phytochrome_cen-reg.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF08446. PAS_2. 1 hit.
PF00360. PHY. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
PRINTSiPR01033. PHYTOCHROME.
SMARTiSM00065. GAF. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50046. PHYTOCHROME_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0REY5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGAGEFPEM PPPEPVDLTN CDREPIHIPG SVQPHGVLLA VRADDDLTVV
60 70 80 90 100
QVSANIAETL GREAAATIGR PLRELVGDAA AKAVRDVVRT AFDLRGAGPV
110 120 130 140 150
DLVVGDGHDL RRYDALLHRV GEQVVIELQA ARSTRPLSYS GTYARTRQSV
160 170 180 190 200
LRLSSSSSLT ELYDVVVEEV RRLTGFDRVM VYRFDAAWNG EVVAEAKLDR
210 220 230 240 250
LNSFHGLHYP ATDIPAQARA LYERSWLRLI PDVDYRPVPL VPAVNIVTGG
260 270 280 290 300
PLDLSDAWLR SVSPIHIEYL QNMGVTASMS ISLLRDGRLW GLIACHHYSG
310 320 330 340 350
RHEPGYEICA AAEFLGHLFS LRLVSRENEQ TLESTLATRE ALDQILVEAQ
360 370 380 390 400
SGGALLVDVL TSGGPNLADL IDCGGVSVAI DGEYRTFGAV PPREAQRAAF
410 420 430 440 450
DALGTEGAIL ACDALPRDAP HMAEHRDVAC GILAFRLSGD EGVAWFRPET
460 470 480 490 500
VRTVDWGGDP RNKELNAREA AGVRLSPRRS FDRWREVVRD RARPWSAHDL
510 520 530 540 550
AIAAELRQHL LRLVYPGARR GADLARLMQE SLLPERLPPI PGFEIEAWYD
560 570 580 590 600
PAAAGRVGGD WYDAVPMPDG RVALIVGDVA GHGVAAAGTM AQLRNALRAY
610 620 630 640 650
VVDVDPADPR PARSVLDRLD RLAAALLPEA IATVAVAVTD PVTGLAQIAS
660 670 680 690 700
SGHPPPVLLS AVGEPVVVEV EIAPPVGAAI PGLAATRPPA TAGEAVDAPG
710 720 730 740 750
GWTARVRLAP GDALALFSDG LTERRTEAPD VGIERLRAQA DGAAAAHPDL
760 770 780
RGLGDSLFRT CRDPDNDDDA TLLLLRRRPP HQP
Length:783
Mass (Da):84,192
Last modified:September 5, 2006 - v1
Checksum:i22ADA252B201818F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573213 Genomic DNA. Translation: CAJ63967.1.
RefSeqiWP_011606421.1. NC_008278.1.
YP_715500.1. NC_008278.1.

Genome annotation databases

KEGGifal:FRAAL5334.
PATRICi21919880. VBIFraAln347_4890.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573213 Genomic DNA. Translation: CAJ63967.1.
RefSeqiWP_011606421.1. NC_008278.1.
YP_715500.1. NC_008278.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi326424.FRAAL5334.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGifal:FRAAL5334.
PATRICi21919880. VBIFraAln347_4890.

Phylogenomic databases

eggNOGiCOG4251.
HOGENOMiHOG000266441.
OMAiADCAREP.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciFALN326424:GJ82-5252-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000014. PAS.
IPR013654. PAS_2.
IPR016132. Phyto_chromo_attachment.
IPR001294. Phytochrome.
IPR013515. Phytochrome_cen-reg.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF08446. PAS_2. 1 hit.
PF00360. PHY. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
PRINTSiPR01033. PHYTOCHROME.
SMARTiSM00065. GAF. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50046. PHYTOCHROME_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ACN14aImported.

Entry informationi

Entry nameiQ0REY5_FRAAA
AccessioniPrimary (citable) accession number: Q0REY5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: April 1, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.