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Q0RD04 (Q0RD04_FRAAA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:FRAAL6046 EMBL CAJ64670.1
OrganismFrankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ64670.1
Taxonomic identifier326424 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length274 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH merR-type DNA-binding domain. RuleBase RU000703

Ontologies

Keywords
   LigandDNA-binding RuleBase RU000703
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processregulation of transcription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

catalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0RD04 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: C9CBE2B65D42D25A

FASTA27429,493
        10         20         30         40         50         60 
MALLTIGEFA RLSRLSPKAL RLYDELGLLR PRQVDPLTGY RRYAPEQLEE ARLVAWLRRL 

        70         80         90        100        110        120 
GMPLARIRRI RELDGPATAR EVAAFLADAV ARANRAVRDL VDLDPDPDPG ANAGAEVDPA 

       130        140        150        160        170        180 
GASRAVGTTL TALLWTGSAL ALVHIGDSRA YLLRGGELRQ ITHDHTFVRS MVEDGRLRPE 

       190        200        210        220        230        240 
EAATHPQRLL LLRALDGGAA TFPDIGLREV RRGDRYLLCS DGLSGAVPAA ELHRVLVTTT 

       250        260        270 
EPEQAVRALV ALANGSGGAD NVTCVVADVV PAVT 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT573213 Genomic DNA. Translation: CAJ64670.1.
RefSeqYP_716184.1. NC_008278.1.

3D structure databases

ProteinModelPortalQ0RD04.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING326424.FRAAL6046.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4234368.
KEGGfal:FRAAL6046.
PATRIC21921186. VBIFraAln347_5535.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0789.
HOGENOMHOG000235782.
OMANQDTAYA.
OrthoDBEOG65N17S.

Enzyme and pathway databases

BioCycFALN326424:GJ82-5943-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF13411. MerR_1. 1 hit.
PF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0RD04_FRAAA
AccessionPrimary (citable) accession number: Q0RD04
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: May 14, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)