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Q0RD04

- Q0RD04_FRAAA

UniProt

Q0RD04 - Q0RD04_FRAAA

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Protein
Submitted name:

Transcriptional regulator (MerR-family)

Gene

FRAAL6046

Organism
Frankia alni (strain ACN14a)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. DNA binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciFALN326424:GJ82-5943-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator (MerR-family)Imported
Gene namesi
Ordered Locus Names:FRAAL6046Imported
OrganismiFrankia alni (strain ACN14a)Imported
Taxonomic identifieri326424 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000000657: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326424.FRAAL6046.

Structurei

3D structure databases

ProteinModelPortaliQ0RD04.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH merR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG0789.
HOGENOMiHOG000235782.
OMAiNQDTAYA.
OrthoDBiEOG65N17S.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF13411. MerR_1. 1 hit.
PF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0RD04-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALLTIGEFA RLSRLSPKAL RLYDELGLLR PRQVDPLTGY RRYAPEQLEE
60 70 80 90 100
ARLVAWLRRL GMPLARIRRI RELDGPATAR EVAAFLADAV ARANRAVRDL
110 120 130 140 150
VDLDPDPDPG ANAGAEVDPA GASRAVGTTL TALLWTGSAL ALVHIGDSRA
160 170 180 190 200
YLLRGGELRQ ITHDHTFVRS MVEDGRLRPE EAATHPQRLL LLRALDGGAA
210 220 230 240 250
TFPDIGLREV RRGDRYLLCS DGLSGAVPAA ELHRVLVTTT EPEQAVRALV
260 270
ALANGSGGAD NVTCVVADVV PAVT
Length:274
Mass (Da):29,493
Last modified:September 5, 2006 - v1
Checksum:iC9CBE2B65D42D25A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT573213 Genomic DNA. Translation: CAJ64670.1.
RefSeqiYP_716184.1. NC_008278.1.

Genome annotation databases

GeneIDi4234368.
KEGGifal:FRAAL6046.
PATRICi21921186. VBIFraAln347_5535.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT573213 Genomic DNA. Translation: CAJ64670.1 .
RefSeqi YP_716184.1. NC_008278.1.

3D structure databases

ProteinModelPortali Q0RD04.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 326424.FRAAL6046.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4234368.
KEGGi fal:FRAAL6046.
PATRICi 21921186. VBIFraAln347_5535.

Phylogenomic databases

eggNOGi COG0789.
HOGENOMi HOG000235782.
OMAi NQDTAYA.
OrthoDBi EOG65N17S.

Enzyme and pathway databases

BioCyci FALN326424:GJ82-5943-MONOMER.

Family and domain databases

Gene3Di 3.60.40.10. 1 hit.
InterProi IPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF13411. MerR_1. 1 hit.
PF00481. PP2C. 1 hit.
[Graphical view ]
SMARTi SM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEi PS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ACN14aImported.

Entry informationi

Entry nameiQ0RD04_FRAAA
AccessioniPrimary (citable) accession number: Q0RD04
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: October 1, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3