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Q0RD04

- Q0RD04_FRAAA

UniProt

Q0RD04 - Q0RD04_FRAAA

Protein
Submitted name:

Transcriptional regulator (MerR-family)

Gene

FRAAL6046

Organism
Frankia alni (strain ACN14a)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (05 Sep 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. DNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: InterPro

    Keywords - Ligandi

    DNA-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciFALN326424:GJ82-5943-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcriptional regulator (MerR-family)Imported
    Gene namesi
    Ordered Locus Names:FRAAL6046Imported
    OrganismiFrankia alni (strain ACN14a)Imported
    Taxonomic identifieri326424 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
    ProteomesiUP000000657: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi326424.FRAAL6046.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0RD04.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 HTH merR-type DNA-binding domain.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0789.
    HOGENOMiHOG000235782.
    OMAiNQDTAYA.
    OrthoDBiEOG65N17S.

    Family and domain databases

    Gene3Di3.60.40.10. 1 hit.
    InterProiIPR009061. DNA-bd_dom_put.
    IPR000551. MerR-type_HTH_dom.
    IPR001932. PP2C-like_dom.
    IPR015655. Protein_Pase_2C.
    [Graphical view]
    PANTHERiPTHR13832. PTHR13832. 1 hit.
    PfamiPF13411. MerR_1. 1 hit.
    PF00481. PP2C. 1 hit.
    [Graphical view]
    SMARTiSM00422. HTH_MERR. 1 hit.
    SM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view]
    SUPFAMiSSF46955. SSF46955. 1 hit.
    SSF81606. SSF81606. 1 hit.
    PROSITEiPS00552. HTH_MERR_1. 1 hit.
    PS50937. HTH_MERR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0RD04-1 [UniParc]FASTAAdd to Basket

    « Hide

    MALLTIGEFA RLSRLSPKAL RLYDELGLLR PRQVDPLTGY RRYAPEQLEE    50
    ARLVAWLRRL GMPLARIRRI RELDGPATAR EVAAFLADAV ARANRAVRDL 100
    VDLDPDPDPG ANAGAEVDPA GASRAVGTTL TALLWTGSAL ALVHIGDSRA 150
    YLLRGGELRQ ITHDHTFVRS MVEDGRLRPE EAATHPQRLL LLRALDGGAA 200
    TFPDIGLREV RRGDRYLLCS DGLSGAVPAA ELHRVLVTTT EPEQAVRALV 250
    ALANGSGGAD NVTCVVADVV PAVT 274
    Length:274
    Mass (Da):29,493
    Last modified:September 5, 2006 - v1
    Checksum:iC9CBE2B65D42D25A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573213 Genomic DNA. Translation: CAJ64670.1.
    RefSeqiYP_716184.1. NC_008278.1.

    Genome annotation databases

    GeneIDi4234368.
    KEGGifal:FRAAL6046.
    PATRICi21921186. VBIFraAln347_5535.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573213 Genomic DNA. Translation: CAJ64670.1 .
    RefSeqi YP_716184.1. NC_008278.1.

    3D structure databases

    ProteinModelPortali Q0RD04.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 326424.FRAAL6046.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4234368.
    KEGGi fal:FRAAL6046.
    PATRICi 21921186. VBIFraAln347_5535.

    Phylogenomic databases

    eggNOGi COG0789.
    HOGENOMi HOG000235782.
    OMAi NQDTAYA.
    OrthoDBi EOG65N17S.

    Enzyme and pathway databases

    BioCyci FALN326424:GJ82-5943-MONOMER.

    Family and domain databases

    Gene3Di 3.60.40.10. 1 hit.
    InterProi IPR009061. DNA-bd_dom_put.
    IPR000551. MerR-type_HTH_dom.
    IPR001932. PP2C-like_dom.
    IPR015655. Protein_Pase_2C.
    [Graphical view ]
    PANTHERi PTHR13832. PTHR13832. 1 hit.
    Pfami PF13411. MerR_1. 1 hit.
    PF00481. PP2C. 1 hit.
    [Graphical view ]
    SMARTi SM00422. HTH_MERR. 1 hit.
    SM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46955. SSF46955. 1 hit.
    SSF81606. SSF81606. 1 hit.
    PROSITEi PS00552. HTH_MERR_1. 1 hit.
    PS50937. HTH_MERR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ACN14aImported.

    Entry informationi

    Entry nameiQ0RD04_FRAAA
    AccessioniPrimary (citable) accession number: Q0RD04
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2006
    Last sequence update: September 5, 2006
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3