Q0RCB8 (Q0RCB8_FRAAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL CAJ64909.1

Gene names

Ordered Locus Names:

FRAAL6286

Organism

Frankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ64909.1

Taxonomic identifier

326424 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	255 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	endodeoxyribonuclease activity, producing 5'-phosphomonoesters Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0RCB8 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 86804F5B5406EE44	FASTA	255	27,078
	10 20 30 40 50 60 MAVVDSHCHL DLMDTEVDAA IAAAVAVGVT RAVTVGVDLP TSRWQADVAD AHPELYAAVA 70 80 90 100 110 120 IHPNEAAHGV SEETFAAVTE LARRDKVRAV GETGLDYFRT PPEAHAAQQE SFRRHIAIAK 130 140 150 160 170 180 ETGRALMIHD RDAHEDTLRI LAEEGAPDTV VFHAFSGDAE MAKVCADAGY VMSFAGNVTF 190 200 210 220 230 240 KNAANLREAA AVAPAELLLV ETDAPFLTPV PWRGRPGGPY LIPLTLRALA ETRGVGVAEL 250 GASIAANAER VFGPW

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT573213 Genomic DNA. Translation: CAJ64909.1.
RefSeq	YP_716422.1. NC_008278.1.
3D structure databases
ProteinModelPortal	Q0RCB8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0RCB8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4233413.
GenomeReviews	Gene locus FRAAL6286 in contig CT573213_GR.
KEGG	fal:FRAAL6286.
PATRIC	21921626. VBIFraAln347_5753.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0084.
HOGENOM	HBG629833.
OMA	LPLVIHT.
PhylomeDB	Q0RCB8.
ProtClustDB	CLSK948945.
Family and domain databases
InterPro	IPR012278. DNase_TatD. IPR018228. DNase_TatD-rel_CS. IPR015991. DNase_TatD_bac-type. IPR001130. TatD_superfamily. [Graphical view]
KO	K03424.
PANTHER	PTHR10060. TatD_DNase. 1 hit.
Pfam	PF01026. TatD_DNase. 1 hit. [Graphical view]
PIRSF	PIRSF005902. DNase_TatD. 1 hit.
TIGRFAMs	TIGR00010. TIGR00010. 1 hit.
PROSITE	PS01137. TATD_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0RCB8_FRAAA

Accession

Primary (citable) accession number: Q0RCB8

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)