Q0RBC8 (Q0RBC8_FRAAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Deoxycytidine triphosphate deaminase HAMAP MF_00146
Short name=dCTP deaminase HAMAP MF_00146
EC=3.5.4.13 HAMAP MF_00146

Gene names

Name:	dcd HAMAP MF_00146 EMBL CAJ65258.1
Ordered Locus Names:	FRAAL6635

Organism

Frankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ65258.1

Taxonomic identifier

326424 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	211 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	dCTP + H2O = dUTP + NH3. HAMAP MF_00146 SAAS SAAS011962
Pathway	Pyrimidine metabolism; dUMP biosynthesis; dUMP from dCTP (dUTP route): step 1/2. HAMAP MF_00146 SAAS SAAS011962
Sequence similarities	Belongs to the dCTP deaminase family. HAMAP MF_00146

Ontologies

Keywords
Biological process	Nucleotide metabolism HAMAP MF_00146 SAAS SAAS011962
Molecular function	Hydrolase HAMAP MF_00146 SAAS SAAS011962 EMBL CAJ65258.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	dUTP biosynthetic process Inferred from electronic annotation. Source: InterPro pyrimidine ribonucleotide biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	dCTP deaminase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0RBC8 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: D8D1CECB8A196D1C	FASTA	211	23,259
	10 20 30 40 50 60 MKIDRACSNV HDVLLSDRDI RTEITAGRIR LDPHDPALIQ PSSIDLRLDR WFRVFANHRY 70 80 90 100 110 120 SHIDPSVEQE DLTELIAPDG DEPFVLHPGE FVLGSTLEIV TLPDDLAGRL EGKSSLGRLG 130 140 150 160 170 180 LLTHSTAGFI DPGFSGHVTL ELSNVATLPI KLWPGMKIGQ LCLFRLTSPA EHSYGSAVYG 190 200 210 SRYQGQRGPT PSRAYRDFTR APVPNGELPP A

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT573213 Genomic DNA. Translation: CAJ65258.1.
RefSeq	YP_716762.2. NC_008278.1.
3D structure databases
ProteinModelPortal	Q0RBC8.
SMR	Q0RBC8. Positions 13-201.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0RBC8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4235706.
GenomeReviews	Gene locus FRAAL6635 in contig CT573213_GR.
KEGG	fal:FRAAL6635.
PATRIC	21922258. VBIFraAln347_6064.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0717.
HOGENOM	HBG553199.
OMA	HTAAYID.
PhylomeDB	Q0RBC8.
ProtClustDB	PRK00416.
Family and domain databases
HAMAP	MF_00146. dCTP_deaminase. [Tree]
InterPro	IPR011962. dCTP_deam. IPR008180. dUTP_pyroPase. [Graphical view]
KO	K01494.
Pfam	PF00692. dUTPase. 1 hit. [Graphical view]
TIGRFAMs	TIGR02274. DCTP_deam. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0RBC8_FRAAA

Accession

Primary (citable) accession number: Q0RBC8

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)