Q0RB72 (Q0RB72_FRAAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Name:	gdhA EMBL CAJ65316.1
Ordered Locus Names:	FRAAL6693

Organism

Frankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ65316.1

Taxonomic identifier

326424 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase PIRNR PIRNR000185 EMBL CAJ65316.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	109	1	By similarity PIRSR PIRSR000185-1

Sequences

	Sequence		Length	Mass (Da)
	Q0RB72 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 2540A2CB8855D0C8	FASTA	420	44,665
	10 20 30 40 50 60 MPVILGSGSA WDTACVQLGN AARHLGLDDG LHELLRTPRR AITVSVPLLR DDGSLMVLTG 70 80 90 100 110 120 YRVQHNLARG PGKGGIRFHP SCDLDEVKAL AMWMTWKCAL MGIPYGGAKG GIAVEPALLS 130 140 150 160 170 180 RQERERMTRR YAAELVPLIG PEKDIPAPDV GTDEQTMAWI MDTYSAHTGY TATGVVTGKP 190 200 210 220 230 240 LSIGGSAGRA GATSRGVQLA LFAALRQTGR DPYDTTVAIQ GFGKVGALAA QYLHDAGCKV 250 260 270 280 290 300 VAVSDVKGGV YNPQGLNPAA LIRHLAEGAE TVVGFPGTDT LTNDDLLELD VDVLVPAALE 310 320 330 340 350 360 GVITIENADR IKAKIIVEGA NGPVTADADR ILEDRGVMVV PDILANGGGV AVSYFEWVQD 370 380 390 400 410 420 MQAYFWSEDE VNDRLRTLME RAYGEVAMLA TTQGVTMRAA AHIIGVSRVA EAHQTRGLYP

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT573213 Genomic DNA. Translation: CAJ65316.1.
RefSeq	YP_716820.1. NC_008278.1.
3D structure databases
ProteinModelPortal	Q0RB72.
SMR	Q0RB72. Positions 9-417.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0RB72.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4233029.
GenomeReviews	Gene locus FRAAL6693 in contig CT573213_GR.
KEGG	fal:FRAAL6693.
PATRIC	21922364. VBIFraAln347_6117.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0334.
HOGENOM	HBG590661.
OMA	EGFRVQH.
ProtClustDB	CLSK949071.
Family and domain databases
InterPro	IPR006095. Glu/Leu/Phe/Val_DH. IPR006096. Glu/Leu/Phe/Val_DH_C. IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom. IPR014362. Glu_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00261.
Pfam	PF00208. ELFV_dehydrog. 1 hit. PF02812. ELFV_dehydrog_N. 1 hit. [Graphical view]
PIRSF	PIRSF000185. Glu_DH. 1 hit.
PRINTS	PR00082. GLFDHDRGNASE.
SMART	SM00839. ELFV_dehydrog. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0RB72_FRAAA

Accession

Primary (citable) accession number: Q0RB72

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)