Q0RB04 (Q0RB04_FRAAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL CAJ65384.1

Gene names

Ordered Locus Names:

FRAAL6761

Organism

Frankia alni (strain ACN14a) [Complete proteome] [HAMAP] EMBL CAJ65384.1

Taxonomic identifier

326424 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	647 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	polysaccharide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	glucan 1,4-alpha-glucosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0RB04 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 384255E5EB6B083D	FASTA	647	72,486
	10 20 30 40 50 60 MRDAVAGRDQ GVRVAHSPVR RSGGSPFPPI AEYGFLSDCE TTCLVAPSGN VEWMCVPRPD 70 80 90 100 110 120 APSVFGSVLD RSAGGFRFGP DRTQIPAGRR YLPGTNILET TWQTPNGWLI VTDCLVVGRW 130 140 150 160 170 180 HRTHERSNTH RRTPSDWDAD HVLLRLARCE HGSVDLSLVC EPNFDYGRQA ESWEYEEDDY 190 200 210 220 230 240 SSGVIANAGS NITLRLRTDL RLGFDGRRAL ARTTLREGDT AFVALTWRPE EPLLPDTYLQ 250 260 270 280 290 300 ACGAVDRTTE FWRQWLSRGM FPDHPWRRHL QRSALALKGL TYAPTGALLA AATTSLPETP 310 320 330 340 350 360 RGERNWDYRY SWLRDSTFAL WGLYTLGLDY EANDFFSFIA DVAEHDENIQ VMYRVGGEPR 370 380 390 400 410 420 IDEEILGHLS GYEGASPVRV GNAAALQRQH DVWGVVLDSV YLHTKSRDYL SERLWPVLVR 430 440 450 460 470 480 LVEAAAAHWQ EPDCGMWEVR GALQHFTVSK MMCWVALDRG RRLAQMRGDT KTAARWKAIA 490 500 510 520 530 540 EEIHAEVCDS GVDHRGVFTQ YYGSKALDAS LLLIPLLGFL PASDERVKAT VLAIADELTE 550 560 570 580 590 600 DGLVLRYRTE ETDDGVAGDE GAFLICSFWL VSALVEIGEL TRARQLCERL LSLASPLDLY 610 620 630 640 AEEIDPNSGR HLGNFPQAFT HLALINAVMY VIRAEDAEAY ARPSPST

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT573213 Genomic DNA. Translation: CAJ65384.1.
RefSeq	YP_716888.1. NC_008278.1.
3D structure databases
ProteinModelPortal	Q0RB04.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0RB04.
Protein family/group databases
CAZy	GH15. Glycoside Hydrolase Family 15.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4237298.
GenomeReviews	Gene locus FRAAL6761 in contig CT573213_GR.
KEGG	fal:FRAAL6761.
PATRIC	21922495. VBIFraAln347_6181.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3387.
HOGENOM	HBG553151.
OMA	VEWMCVP.
ProtClustDB	CLSK872058.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR011613. Glyco_hydro_15. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
Pfam	PF00723. Glyco_hydro_15. 1 hit. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0RB04_FRAAA

Accession

Primary (citable) accession number: Q0RB04

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)