Q0PRN1 (Q0PRN1_CLOCE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbohydrate binding family 6 EMBL ACL75594.1

Submitted name:
GH59 galactosidase EMBL ABG76970.1

Gene names

Name:	gal59A EMBL ABG76970.1
Ordered Locus Names:	Ccel_1238

Organism

Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) [Complete proteome] [HAMAP] EMBL ABG76970.1

Taxonomic identifier

394503 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	1122 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Domain	Signal EMBL ACL75594.1
Technical term	3D-structure PDB 2V4V Complete proteome
Gene Ontology (GO)
Biological process	galactosylceramide catabolic process Inferred from electronic annotation. Source: InterPro polysaccharide catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro galactosylceramidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	31 – 1122	1092	Potential EMBL ACL75594.1		PRO_5000429982

Sequences

	Sequence		Length	Mass (Da)
	Q0PRN1 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 4E3C9F00002BCD1D	FASTA	1,122	121,765
	10 20 30 40 50 60 MKRKILSVLL LVTMTTALFS ATPMNTASAA STDFVLDGNN IKAGNINGLT FKGFGVLSGN 70 80 90 100 110 120 SSSALLMDYK SEHPEKYTEL LQILFGGKNP IMTHVKIEMG NDRNNSTGPD PSTMRWENET 130 140 150 160 170 180 ANVKRHPGFQ LAADAKKVNP NLKVSILRWN APGWANSNDK IYTWYKNTIL AAYRQYGYMI 190 200 210 220 230 240 DYVNPGVNEQ TPNLTWTKQY AQRIKTDSTG FNNAEERALY NNIKVVISDE VSVGSFGDDM 250 260 270 280 290 300 VSDSTLRDAV SVAAYHYNTD DNSLGSFKQL AESFDKEVWN SEAQATFSNS SFRPNNNMKD 310 320 330 340 350 360 PTVAGTGIGG TNGPLEMGNT VIKGFVNSRR THFIYQPVIG SFYEGGQYSF KELVSARDPW 370 380 390 400 410 420 SGWIHYDAGL VILRHFSWFS KAGWENESNT AGVWRAVPQA SFTGATGTNP VNGRNGTPSY 430 440 450 460 470 480 MTLASPDKHD FSTIFINDSE YSKTYTFKTI NMAYSGNPSL EVWETRAADK GASFNSNYMK 490 500 510 520 530 540 YTGTVSTNSS GVYTVNVKPY SIVTVTTLSN SGKAEFNTPL PVEGDRPVLD TDKTGSMQDT 550 560 570 580 590 600 RDNILYADNF DYSSKTAPVI AEGGQITGTQ SYIDSRGGSK SAIPRYASDR NGAFEVYLPD 610 620 630 640 650 660 GSSNYILRQQ VNQSSMGLGG TWNNGNPITG IGDNRWMNYK ASVDVSFEHN STEGGNNYAA 670 680 690 700 710 720 IGARQQGGEN SHYLNGTPYI LKFWFDGGWS LLVNGSSVAN GNVASGSGGV KISGFNTAYN 730 740 750 760 770 780 AWHNISIMVA DNKVTAYLDN TILYTYTDTT QRLSGRIDLA SGYYNTCFDN LKVETIDGYA 790 800 810 820 830 840 PYYSEMLDNL EMYDLSSVSA TKLVYGGSWA HENGKSMYNY QRSLSTSQGI GATIQYSFTG 850 860 870 880 890 900 TGLDILGANN GSAKLEVTVD GRVVNSSVGT MVSGNLHQNF TLHGLEYGKH TVCLKVLSGT 910 920 930 940 950 960 MVVDAVGVVA NIAGASEIPV EQSAYSRIEA ESYSNQSGIQ TETCSEGGED VGFVENGDYT 970 980 990 1000 1010 1020 VYNNVDFGDG VGGFQARVAS ATSGGNIEIR LDSSTGTLIG TCPVAGTGDW QTYTDAKCTV 1030 1040 1050 1060 1070 1080 SGVTGKHDVY LVFKGDSGYL FNLNWFTFSE KTVIGNLGDI NSDGQVDAID LQVLKKYLLQ 1090 1100 1110 1120 LGEIGDTKLA DLDANGEINA IDFSLLKQFL LGTIISFPGE AL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Analysis of the structural and functional diversity of plant cell wall specific family 6 carbohydrate binding modules." Abbott D.W., Ficko-Blean E., van Bueren A.L., Rogowski A., Cartmell A., Coutinho P.M., Henrissat B., Gilbert H.J., Boraston A.B. Biochemistry 48:10395-10404(2009) [PubMed: 19788273] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) OF 922-1050.
[2]	"Enzyme diversity of the cellulolytic system produced by Clostridium cellulolyticum explored by two-dimensional analysis: identification of seven genes encoding new dockerin-containing proteins." Blouzard J.C., Bourgeois C., de Philip P., Valette O., Belaich A., Tardif C., Belaich J.P., Pages S. J. Bacteriol. 189:2300-2309(2007) [PubMed: 17209020] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 35319 EMBL ABG76970.1.
[3]	"Complete sequence of Clostridium cellulolyticum H10." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. , Ivanova N., Zhou J., Richardson P. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35319 / DSM 5812 / JCM 6584 / H10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

DQ778333 Genomic DNA. Translation: ABG76970.1.
CP001348 Genomic DNA. Translation: ACL75594.1.

RefSeq

YP_002505574.1. NC_011898.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2V4V	X-ray	1.50	A	922-1050	[»]

ProteinModelPortal

Q0PRN1.

ModBase

Search...

Protein-protein interaction databases

STRING

Q0PRN1.

Protein family/group databases

CAZy

CBM6. Carbohydrate-Binding Module Family 6.
GH59. Glycoside Hydrolase Family 59.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

7310035.

GenomeReviews

Gene locus Ccel_1238 in contig CP001348_GR.

KEGG

cce:Ccel_1238.

PATRIC

19433311. VBICloCel57783_1278.

Organism-specific databases

CMR

Search...

Phylogenomic databases

ProtClustDB

CLSK2546464.

Family and domain databases

InterPro

IPR016134. Cellulos_enz_dockerin_1.
IPR002105. Cellulos_enz_dockerin_1_Ca-bd.
IPR006584. Cellulose-bd_IV.
IPR005084. CMB_fam6.
IPR018242. Dockerin_1.
IPR018247. EF_Hand_1_Ca_BS.
IPR008979. Galactose-bd-like.
IPR001286. Glyco_hydro_59.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]

Gene3D

G3DSA:1.10.1330.10. Cellulos_enz_dockerin_1. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.

Pfam

PF03422. CBM_6. 1 hit.
PF00404. Dockerin_1. 2 hits.
PF02057. Glyco_hydro_59. 1 hit.
[Graphical view]

SMART

SM00606. CBD_IV. 1 hit.
[Graphical view]

SUPFAM

SSF63446. Cellulos_enz_dockerin_1. 1 hit.
SSF49785. Gal_bind_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.

PROSITE

PS51175. CBM6. 1 hit.
PS00448. CLOS_CELLULOSOME_RPT. 1 hit.
PS00018. EF_HAND_1. 2 hits.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q0PRN1_CLOCE

Accession

Primary (citable) accession number: Q0PRN1

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)